RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RPL22P35268 128 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 MAPK10P53779 464 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 BDH1Q02338 343 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 C15orf59Q2T9L4 293 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 GXYLT1Q4G148 440 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 GDF6Q6KF10 455 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 SPESP1Q6UW49 350 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 UNC5AQ6ZN44 842 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 CCDC80Q76M96 950 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 DGLUCYQ7Z3D6 616 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 CLVS1Q8IUQ0 354 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 MSL3Q8N5Y2 521 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 MEIOBQ8N635 442 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 IL22RA1Q8N6P7 574 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 AMER2Q8N7J2 671 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 C4orf32Q8N8J7 132 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ANKRD52Q8NB46 1076 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 DNAAF1Q8NEP3 725 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 DNAJB14Q8TBM8 379 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 KLK6Q92876 244 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 EXOSC8Q96B26 276 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 OR52E6Q96RD3 313 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 DCLRE1BQ9H816 532 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 PNO1Q9NRX1 252 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 MORF4L1Q9UBU8 362 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 STOML2Q9UJZ1 356 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 C3orf18Q9UK00 162 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 PCDHGC3Q9UN70 934 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 DHRS7Q9Y394 339 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 NR2E1Q9Y466 385 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 HEMK1Q9Y5R4 338 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 SLIT2O94813 1529 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 FRMPD4Q14CM0 1322 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 SMCO3A2RU48 225 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ARHGEF33A8MVX0 844 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 TNFRSF10BO14763 440 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 KLRC4O43908 158 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 OR1I1O60431 355 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 BPNT1O95861 308 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 TRBC1P01850 177 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ATP4AP20648 1035 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 HNRNPH3P31942 346 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 SLC12A3P55017 1021 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 CHAF1BQ13112 559 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 LAPTM5Q13571 262 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 KCNA10Q16322 511 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ALG10Q5BKT4 473 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 WDR45BQ5MNZ6 344 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 TATDN1Q6P1N9 297 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 KYAT3Q6YP21 454 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 MOB2Q70IA6 237 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 TMPRSS6Q8IU80 811 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 PCDH20Q8N6Y1 951 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 LRRC17Q8N6Y2 441 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ZNF611Q8N823 705 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 EIF1ADQ8N9N8 165 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 TCP10LQ8TDR4 215 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 NMD3Q96D46 503 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 DCUN1D5Q9BTE7 237 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 PAIP1Q9H074 479 aaKnown RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 IFT46Q9NQC8 304 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 HMGXB4Q9UGU5 601 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 AHDC1Q5TGY3 1603 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 CLUHO75153 1309 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 A8MU76 341 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 TRAFD1O14545 582 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 TPP1O14773 563 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 SYN1P17600 705 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 BMP6P22004 513 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 DDX6P26196 483 aaKnown RBP eCLIP5.74□□□□□ -1.49
USP38-203ENST00000511739 PTPN4P29074 926 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 GDI1P31150 447 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 FOXK1P85037 733 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 CDK16Q00536 496 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 C2orf80Q0P641 193 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 SP140Q13342 867 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 QPRTQ15274 297 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.74□□□□□ -1.49
USP38-203ENST00000511739 ABRAXAS1Q6UWZ7 409 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 VSTM1Q6UX27 236 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ZCCHC23Q6ZST2 131 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 OTOP1Q7RTM1 612 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 POU5F2Q8N7G0 328 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 PLA2G15Q8NCC3 412 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ZNF540Q8NDQ6 660 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 OR4K17Q8NGC6 315 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 OR2L8Q8NGY9 312 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 FBXO25Q8TCJ0 367 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 PIH1D2Q8WWB5 315 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 SHC3Q92529 594 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 KAT2AQ92830 837 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 TMEM68Q96MH6 324 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ZNF717Q9BY31 904 aaPredicted RBP5.74□□□□□ -1.49
USP38-203ENST00000511739 TBL1XR1Q9BZK7 514 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 ATG10Q9H0Y0 220 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 C11orf49Q9H6J7 331 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 NMUR1Q9HB89 426 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 RAB21Q9UL25 225 aa5.74□□□□□ -1.49
USP38-203ENST00000511739 NAALADL1Q9UQQ1 740 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms