RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FAF1Q9UNN5 650 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 C9orf84Q5VXU9 1444 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 TRAPPC8Q9Y2L5 1435 aa5.02□□□□□ -1.61
TOPBP1-206ENST00000508524 MAGI2Q86UL8 1455 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 ZCWPW2A0A1B0GU75 182 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 A0A1W2PRG0 241 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 M0QZ24 198 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 SEC14L2O76054 403 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 IGHV4-39P01824 125 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 PAX1P15863 534 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 MMP14P50281 582 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 RPL24P83731 157 aaKnown RBP5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 GAGE5Q13069 117 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 GAGE6Q13070 117 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 TMEM35AQ53FP2 167 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 ATG9AQ7Z3C6 839 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 GPR180Q86V85 440 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 OR52I2Q8NH67 350 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 METTL6Q8TCB7 284 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 SLC44A1Q8WWI5 657 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 TMEM68Q96MH6 324 aa5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.01□□□□□ -1.61
TOPBP1-206ENST00000508524 NEURL4Q96JN8 1562 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 SCAPERQ9BY12 1400 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 A0A1B0GVC2 190 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 A0A1W2PP11 408 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 A0A1W2PQF6 199 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 EIF3CLB5ME19 914 aaKnown RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 FAM90A26D6RGX4 464 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 EDIL3O43854 480 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 KRT10P13645 584 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 UGT1A1P22309 533 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 UBA1P22314 1058 aaKnown RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 RARSP54136 660 aaKnown RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 F2RL1P55085 397 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 OLR1P78380 273 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 TMEM115Q12893 351 aaPredicted RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 CCDC6Q16204 474 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 CCNYL2Q5T2Q4 361 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 ZNF704Q6ZNC4 412 aaPredicted RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 GSTA5Q7RTV2 222 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 SMC5Q8IY18 1101 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 LINGO1Q96FE5 620 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 HARBI1Q96MB7 349 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 RANBP17Q9H2T7 1088 aaKnown RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 CNOT8Q9UFF9 292 aaKnown RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 NUP153P49790 1475 aaKnown RBP5□□□□□ -1.61
TOPBP1-206ENST00000508524 RAPGEF2Q9Y4G8 1499 aa5□□□□□ -1.61
TOPBP1-206ENST00000508524 VWDEQ8N2E2 1590 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 DIP2CQ9Y2E4 1556 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 C1orf226A1L170 272 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 ANKRD28O15084 1053 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 EIF3DO15371 548 aaKnown RBP eCLIP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 KCNN4O15554 427 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 TOM1O60784 492 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 PRSS1P07477 247 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 RGS2P41220 211 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 RPL7AP62424 266 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 SREBF2Q12772 1141 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 MAD2L1Q13257 205 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 DCTN2Q13561 401 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 FRG1Q14331 258 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 MYLK3Q32MK0 819 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 LCE1FQ5T754 118 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 LCN10Q6JVE6 187 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 FBXL22Q6P050 247 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 PAPD4Q6PIY7 484 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 MAP7D3Q8IWC1 876 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 GRAPLQ8TC17 118 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 WBP2Q969T9 261 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 ZNF524Q96C55 264 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 INTS12Q96CB8 462 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 TBATAQ96M53 351 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 PREBQ9HCU5 417 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 PLA2R1Q13018 1463 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 SHANK2Q9UPX8 1470 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 EP400Q96L91 3159 aa4.99□□□□□ -1.61
TOPBP1-206ENST00000508524 ABCA6Q8N139 1617 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 HS3ST1O14792 307 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 APOHP02749 345 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 DCTP40126 519 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 AMPHP49418 695 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 TERF1P54274 439 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 ATP12AP54707 1039 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 COG7P83436 770 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 PLIN5Q00G26 463 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 CEBPZQ03701 1054 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 CCNG2Q16589 344 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 DPCR1Q3MIW9 517 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 KRTCAP3Q53RY4 240 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 R3HCC1LQ7Z5L2 792 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 TMEM255BQ8WV15 326 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 PERPQ96FX8 193 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 ST6GAL2Q96JF0 529 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 MAP7D2Q96T17 732 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 FAM118AQ9NWS6 357 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 DLGAP2Q9P1A6 1054 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 OR14J1Q9UGF5 321 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms