RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SLCO1B1Q9Y6L6 691 aa19.87■□□□□ 0.77
USP53-203ENST00000507597 DGKBQ9Y6T7 804 aa19.87■□□□□ 0.77
USP53-203ENST00000507597 LRRK1Q38SD2 2015 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 PRSS38A1L453 326 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 KCNJ13O60928 360 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 BANF1O75531 89 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 AP2A2O94973 939 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 CSF2P04141 144 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 VCLP18206 1134 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 STX2P32856 288 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 RXRGP48443 463 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 ARCN1P48444 511 aaKnown RBP19.86■□□□□ 0.77
USP53-203ENST00000507597 IRX4P78413 519 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 MGAT5Q09328 741 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 SPEM2Q0P670 501 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 FZD2Q14332 565 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 MAP9Q49MG5 647 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 DOK6Q6PKX4 331 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 CCNI2Q6ZMN8 369 aaPredicted RBP19.86■□□□□ 0.77
USP53-203ENST00000507597 KIAA0408Q6ZU52 694 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 LRRC6Q86X45 466 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 HID1Q8IV36 788 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 SLC22A18ASQ8N1D0 253 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 AGGF1Q8N302 714 aaeCLIP19.86■□□□□ 0.776e-9■■■□□ 16.6
USP53-203ENST00000507597 GTPBP2Q9BX10 602 aaKnown RBP19.86■□□□□ 0.77
USP53-203ENST00000507597 FAM96AQ9H5X1 160 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 INTS10Q9NVR2 710 aaKnown RBP19.86■□□□□ 0.77
USP53-203ENST00000507597 SPASTQ9UBP0 616 aa19.86■□□□□ 0.77
USP53-203ENST00000507597 NEMP2A6NFY4 417 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 TMEM202A6NGA9 273 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 OR51F1A6NGY5 319 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 KMOO15229 486 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 NUAK1O60285 661 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 CEACAM5P06731 702 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 GSTM1P09488 218 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 OR56A5P0C7T3 313 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 ATP1B2P14415 290 aaPredicted RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 JUNDP17535 347 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 ENGP17813 658 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 HK3P52790 923 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 GSTM4Q03013 218 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 LRP8Q14114 963 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 ELOCQ15369 112 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 ZNF423Q2M1K9 1284 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 ERCC6LQ2NKX8 1250 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 HLA-BQ31612 363 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 PSAPL1Q6NUJ1 521 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 LAYNQ6UX15 382 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 PACS1Q6VY07 963 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 TRMT10CQ7L0Y3 403 aaKnown RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 ADGRG6Q86SQ4 1221 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 LRRTM4Q86VH4 590 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 SPATS2Q86XZ4 545 aaKnown RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 IGDCC3Q8IVU1 814 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 FSTL5Q8N475 847 aaPredicted RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 C9orf72Q96LT7 481 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 CLPBQ9H078 707 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 OR2AG1Q9H205 316 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 CCDC68Q9H2F9 335 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 GAREM1Q9H706 876 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 CARS2Q9HA77 564 aaKnown RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 CYP4F12Q9HCS2 524 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 RRAGDQ9NQL2 400 aaPredicted RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 ZFATQ9P243 1243 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 TXNDC16Q9P2K2 825 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 ATXN10Q9UBB4 475 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 APOBEC3BQ9UH17 382 aaKnown RBP19.85■□□□□ 0.77
USP53-203ENST00000507597 ZNHIT2Q9UHR6 403 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 TMEM98Q9Y2Y6 226 aa19.85■□□□□ 0.77
USP53-203ENST00000507597 PLXNA2O75051 1894 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 TNRC6BQ9UPQ9 1833 aaKnown RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 PATE3B3GLJ2 98 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 H3BMM5 538 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 GRID2O43424 1007 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 NME1P15531 152 aaKnown RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 CCT8P50990 548 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 FASTKD3Q14CZ7 662 aaKnown RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 DBN1Q16643 649 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 INAVAQ3KP66 663 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 AASDHQ4L235 1098 aaPredicted RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 HSP90AA5PQ58FG0 334 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 ZNF470Q6ECI4 717 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 RD3Q7Z3Z2 195 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 CILP2Q8IUL8 1156 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 PHACTR4Q8IZ21 702 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 CNPY4Q8N129 248 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 SCARF2Q96GP6 870 aaPredicted RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 IARS2Q9NSE4 1012 aaKnown RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 TRNAU1APQ9NX07 287 aaKnown RBP19.84■□□□□ 0.77
USP53-203ENST00000507597 SUFUQ9UMX1 484 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 DOLKQ9UPQ8 538 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 GPSM3Q9Y4H4 160 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 PCDHB1Q9Y5F3 818 aa19.84■□□□□ 0.77
USP53-203ENST00000507597 IGLV3-16A0A075B6K0 115 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 A0A1B0GTQ1 180 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 PRMT5O14744 637 aaPredicted RBP19.83■□□□□ 0.77
USP53-203ENST00000507597 ZNF883P0CG24 379 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 ECHS1P30084 290 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 GNPDA1P46926 289 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 ILF3Q12906 894 aaKnown RBP eCLIP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms