RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 SYT12Q8IV01 421 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 SIDT2Q8NBJ9 832 aaKnown RBP9.37□□□□□ -0.91
NEK1-203ENST00000507142 RAB11FIP5Q9BXF6 653 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 ERAL1O75616 437 aaKnown RBP9.37□□□□□ -0.91
NEK1-203ENST00000507142 SLC35G6P0C7Q6 338 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 ADRB3P13945 408 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 GTF2E2P29084 291 aaKnown RBP9.37□□□□□ -0.91
NEK1-203ENST00000507142 TXNRD3NBQ6F5E7 133 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 LAYNQ6UX15 382 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEK1-203ENST00000507142 ZC3H3Q8IXZ2 948 aaKnown RBP9.37□□□□□ -0.91
NEK1-203ENST00000507142 CPXM2Q8N436 756 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 OR4E2Q8NGC2 313 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 SLC22A18Q96BI1 424 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 CCM2Q9BSQ5 444 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 PHACTR1Q9C0D0 580 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 RETREG1Q9H6L5 497 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 OSER1Q9NX31 292 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 TMCO1Q9UM00 188 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 DDX3YO15523 660 aaKnown RBP9.37□□□□□ -0.91
NEK1-203ENST00000507142 RGS14O43566 566 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 SOCS5O75159 536 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 CHN1P15882 459 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 PTGER3P43115 390 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 CENPAP49450 140 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 PRKAG1P54619 331 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 ATP13A5Q4VNC0 1218 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 CHST14Q8NCH0 376 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 TTLL2Q9BWV7 592 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 DPY30Q9C005 99 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 MRPS30Q9NP92 439 aaKnown RBP9.37□□□□□ -0.91
NEK1-203ENST00000507142 CYTH4Q9UIA0 394 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 CAPN7Q9Y6W3 813 aa9.37□□□□□ -0.91
NEK1-203ENST00000507142 PRAMEF26H0Y7S4 382 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 BCAT2O15382 392 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 FYNP06241 537 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 PTP4A2Q12974 167 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 HNRNPA1L2Q32P51 320 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 INO80DQ53TQ3 878 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 USP53Q70EK8 1073 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 TMEM126BQ8IUX1 230 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 FNDC5Q8NAU1 212 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 LMO3Q8TAP4 145 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 CHFRQ96EP1 664 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 THUMPD3Q9BV44 507 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 MRPL1Q9BYD6 325 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 POLG2Q9UHN1 485 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 AKAP10O43572 662 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 OR1F1O43749 312 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 PGLSO95336 258 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 ENO3P13929 434 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 ARCN1P48444 511 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 CLDN10P78369 228 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 CPSF6Q16630 551 aaKnown RBP eCLIP9.36□□□□□ -0.91
NEK1-203ENST00000507142 HECTD2Q5U5R9 776 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 NAPRTQ6XQN6 538 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 PCYOX1LQ8NBM8 494 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 TRPC4APQ8TEL6 797 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 KCTD4Q8WVF5 259 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 MRPL40Q9NQ50 206 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 ECM29Q5VYK3 1845 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 ADAMTSL1Q8N6G6 1762 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 FAM221BA6H8Z2 402 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 ZSCAN9O15535 394 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 SRCP12931 536 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 C6P13671 934 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 HPCAL1P37235 193 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 CCNFP41002 786 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 RPL26P61254 145 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 MAD2L1Q13257 205 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 C16orf46Q6P387 395 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 SUN3Q8TAQ9 357 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 NDC1Q9BTX1 674 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 KIF17Q9P2E2 1029 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 PCYOX1Q9UHG3 505 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 RPL26L1Q9UNX3 145 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 MTCH2Q9Y6C9 303 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 CLDN4O14493 209 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 ENO2P09104 434 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 TSHRP16473 764 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 NMBRP28336 390 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 SLC1A5Q15758 541 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 CPNE8Q86YQ8 564 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 WDTC1Q8N5D0 677 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 CMASQ8NFW8 434 aaPredicted RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 MFSD3Q96ES6 412 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 KLHL25Q9H0H3 589 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
NEK1-203ENST00000507142 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
NEK1-203ENST00000507142 DUX1O43812 170 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ATP1B2P14415 290 aaPredicted RBP9.35□□□□□ -0.91
NEK1-203ENST00000507142 CAPZA2P47755 286 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 SESN3P58005 492 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ADHFE1Q8IWW8 467 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 OXR1Q8N573 874 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 ZMIZ2Q8NF64 920 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 SCAMP4Q969E2 229 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 PWWP2AQ96N64 755 aa9.35□□□□□ -0.91
NEK1-203ENST00000507142 SLC22A12Q96S37 553 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms