RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 SMC6Q96SB8 1091 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 ADPGKQ9BRR6 497 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 EDEM3Q9BZQ6 932 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 TMEM39BQ9GZU3 492 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 ANKRD2Q9GZV1 360 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 SLCO5A1Q9H2Y9 848 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 RAD21L1Q9H4I0 556 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 C17orf75Q9HAS0 396 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 GRPEL1Q9HAV7 217 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 POT1Q9NUX5 634 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 ACSL5Q9ULC5 683 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 FZD10Q9ULW2 581 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 ABCC8Q09428 1581 aa5.92□□□□□ -1.46
CHD1-204ENST00000505982 TOP2AP11388 1531 aaKnown RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 SPINT2O43291 252 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 PLPP2O43688 288 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 TADA2AO75478 443 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 CH25HO95992 272 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 HSP90AB1P08238 724 aaKnown RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 MC5RP33032 325 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 COPB2P35606 906 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 PPARDQ03181 441 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 MEP1AQ16819 746 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 CRY2Q49AN0 593 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 FAM98BQ52LJ0 330 aaKnown RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 HECTD3Q5T447 861 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 C1QTNF12Q5T7M4 302 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 C6orf163Q5TEZ5 329 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 TMEM211Q6ICI0 200 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 INTS8Q75QN2 995 aaKnown RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 DNAJB7Q7Z6W7 309 aaPredicted RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 PIM3Q86V86 326 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 THNSL1Q8IYQ7 743 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 BEST3Q8N1M1 668 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 FBXO39Q8N4B4 442 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 TC2NQ8N9U0 490 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 TSPAN14Q8NG11 270 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 OIT3Q8WWZ8 545 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 SIPA1Q96FS4 1042 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 SEMA3CQ99985 751 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 HGH1Q9BTY7 390 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 SPRTNQ9H040 489 aaPredicted RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 KCNK15Q9H427 330 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 GOLPH3LQ9H4A5 285 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 PFDN4Q9NQP4 134 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 GDE1Q9NZC3 331 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 LARSQ9P2J5 1176 aaKnown RBP5.91□□□□□ -1.46
CHD1-204ENST00000505982 INSL5Q9Y5Q6 135 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 KIF21BO75037 1637 aa5.91□□□□□ -1.46
CHD1-204ENST00000505982 IGHV4-28A0A0C4DH34 117 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 TRUB2O95900 331 aaKnown RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 LCATP04180 440 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 TMEM191BP0C7N4 346 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 SCG2P13521 617 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 DNASE1P24855 282 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 C21orf33P30042 268 aaPredicted RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 RFX5P48382 616 aaPredicted RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 TNIP1Q15025 636 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 CST9LP1Q5W188 147 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 FRG2Q64ET8 278 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 SHQ1Q6PI26 577 aaKnown RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 IQCHQ86VS3 1027 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 CEP97Q8IW35 865 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 RASGEF1CQ8N431 466 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 AFAP1Q8N556 730 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 RBM15BQ8NDT2 890 aaKnown RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 Q8NFD4 153 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 RPL36ALQ969Q0 106 aaKnown RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 URB1-AS1Q96HZ7 61 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 RBM38Q9H0Z9 239 aaKnown RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 ALDH8A1Q9H2A2 487 aaPredicted RBP5.9□□□□□ -1.46
CHD1-204ENST00000505982 OPA3Q9H6K4 179 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 ZBTB40Q9NUA8 1239 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 SELENONQ9NZV5 590 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 BTBD3Q9Y2F9 522 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 SQORQ9Y6N5 450 aa5.9□□□□□ -1.46
CHD1-204ENST00000505982 ATXN2Q99700 1313 aaKnown RBP5.9□□□□□ -1.47
CHD1-204ENST00000505982 TNFRSF13BO14836 293 aaPredicted RBP5.89□□□□□ -1.47
CHD1-204ENST00000505982 SLC16A5O15375 505 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 ZBTB43O43298 467 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 RGS14O43566 566 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 SPRY3O43610 288 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 NDUFS7O75251 213 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 SOX30O94993 753 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 FDPSP14324 419 aaKnown RBP5.89□□□□□ -1.47
CHD1-204ENST00000505982 ERCC2P18074 760 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 NMBRP28336 390 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 CTNNA1P35221 906 aaKnown RBP5.89□□□□□ -1.47
CHD1-204ENST00000505982 MXI1P50539 228 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 HNRNPH2P55795 449 aaKnown RBP5.89□□□□□ -1.47
CHD1-204ENST00000505982 SIRPAP78324 504 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 SPOCK1Q08629 439 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 RALGDSQ12967 914 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 KCNT1Q5JUK3 1230 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 PCDH20Q8N6Y1 951 aaKnown RBP5.89□□□□□ -1.47
CHD1-204ENST00000505982 EMC1Q8N766 993 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 HMGCLL1Q8TB92 370 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 DACH2Q96NX9 599 aa5.89□□□□□ -1.47
CHD1-204ENST00000505982 RAB3IPQ96QF0 476 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms