RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 CDK18Q07002 472 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 CCDC70Q6NSX1 233 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 TRAM1L1Q8N609 369 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 RNF25Q96BH1 459 aaPredicted RBP24.38■■□□□ 1.49
HERC4-212ENST00000505760 OLFM3Q96PB7 478 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 SLC12A9Q9BXP2 914 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 BRD8Q9H0E9 1235 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 EPB41L1Q9H4G0 881 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 TRIM39Q9HCM9 518 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 STARD5Q9NSY2 213 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 SPTLC3Q9NUV7 552 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 KLHL3Q9UH77 587 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 ZNF711Q9Y462 761 aa24.38■■□□□ 1.49
HERC4-212ENST00000505760 RAD1O60671 282 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 TNNT1P13805 278 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 MC2RQ01718 297 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 INSCQ1MX18 579 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 LRRC38Q5VT99 294 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 PDPK2PQ6A1A2 396 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 CRTC3Q6UUV7 619 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 CEACAM20Q6UY09 585 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 TMC3Q7Z5M5 1100 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 GLYATL1Q969I3 302 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 CHP1Q99653 195 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 CTRCQ99895 268 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 TBC1D10AQ9BXI6 508 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 NHEJ1Q9H9Q4 299 aaPredicted RBP24.37■■□□□ 1.49
HERC4-212ENST00000505760 ABHD10Q9NUJ1 306 aa24.37■■□□□ 1.49
HERC4-212ENST00000505760 ITGB6P18564 788 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 PTMSP20962 102 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 CLCNKAP51800 687 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 KCNC4Q03721 635 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 B4GALNT4Q76KP1 1039 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 ADGRG6Q86SQ4 1221 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 SPATA22Q8NHS9 363 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 RTP4Q96DX8 246 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 ZPBPQ9BS86 351 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 CLMPQ9H6B4 373 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 DDX56Q9NY93 547 aaKnown RBP24.36■■□□□ 1.49
HERC4-212ENST00000505760 NFKBIL1Q9UBC1 381 aaPredicted RBP24.36■■□□□ 1.49
HERC4-212ENST00000505760 PILRAQ9UKJ1 303 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 ADGRG1Q9Y653 693 aa24.36■■□□□ 1.49
HERC4-212ENST00000505760 PMPCBO75439 489 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 MT-CYBP00156 380 aaPredicted RBP24.35■■□□□ 1.49
HERC4-212ENST00000505760 SLC14A2Q15849 920 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 PLA2G4EQ3MJ16 856 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 TEX44Q53QW1 395 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 BORAQ6PGQ7 559 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 PLXDC1Q8IUK5 500 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 TRIM48Q8IWZ4 208 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 RHOT1Q8IXI2 618 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 PLEKHG4BQ96PX9 1271 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 SRPK1Q96SB4 655 aaKnown RBP24.35■■□□□ 1.49
HERC4-212ENST00000505760 GLOD4Q9HC38 313 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 FBXO8Q9NRD0 319 aa24.35■■□□□ 1.49
HERC4-212ENST00000505760 A0A0A6YYK5 440 aaPredicted RBP24.34■■□□□ 1.49
HERC4-212ENST00000505760 LILRA5A6NI73 299 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 CHUKO15111 745 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 KMOO15229 486 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 CAPN5O15484 640 aaPredicted RBP24.34■■□□□ 1.49
HERC4-212ENST00000505760 PPFIA2O75334 1257 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 NDST3O95803 873 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 SLC1A1P43005 524 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 UBE2IP63279 158 aaKnown RBP24.34■■□□□ 1.49
HERC4-212ENST00000505760 NFKB2Q00653 900 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 CLCA4Q14CN2 919 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 BZW1Q7L1Q6 419 aaKnown RBP24.34■■□□□ 1.49
HERC4-212ENST00000505760 LRRTM4Q86VH4 590 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 NLGN4XQ8N0W4 816 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 NLGN4YQ8NFZ3 816 aaPredicted RBP24.34■■□□□ 1.49
HERC4-212ENST00000505760 KIAA1143Q96AT1 154 aaPredicted RBP24.34■■□□□ 1.49
HERC4-212ENST00000505760 TADA1Q96BN2 335 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 DNAJC16Q9Y2G8 782 aa24.34■■□□□ 1.49
HERC4-212ENST00000505760 ZNF891A8MT65 544 aaPredicted RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 PDZK1P1A8MUH7 402 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 SPOPO43791 374 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 MFAP3LO75121 409 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 WISP1O95388 367 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 VIPP01282 170 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 ZNF7P17097 686 aaPredicted RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 BPIP17213 487 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 XRCC1P18887 633 aaPredicted RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 MAP4P27816 1152 aaKnown RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 NOP2P46087 812 aaKnown RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 NR2C2P49116 596 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 SEPT7Q16181 437 aaKnown RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 MFSD7Q6UXD7 560 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 VSTM4Q8IW00 320 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 GPN2Q9H9Y4 310 aaPredicted RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 UCK1Q9HA47 277 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 APMAPQ9HDC9 416 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 GEMIN8Q9NWZ8 242 aaKnown RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 UBP1Q9NZI7 540 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 SCHIP1Q9P0W5 487 aaPredicted RBP24.33■■□□□ 1.49
HERC4-212ENST00000505760 SLC23A2Q9UGH3 650 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 HYOU1Q9Y4L1 999 aa24.33■■□□□ 1.49
HERC4-212ENST00000505760 POLR1CO15160 346 aaPredicted RBP24.32■■□□□ 1.48
HERC4-212ENST00000505760 VEGFDO43915 354 aa24.32■■□□□ 1.48
HERC4-212ENST00000505760 MTX2O75431 263 aa24.32■■□□□ 1.48
HERC4-212ENST00000505760 CDK14O94921 469 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms