RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LYSMD1Q96S90 227 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 DPYSL5Q9BPU6 564 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 POLR1EQ9GZS1 481 aaKnown RBP5.78□□□□□ -1.48
GYPB-205ENST00000505583 PCDH9Q9HC56 1237 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 RBM22Q9NW64 420 aaKnown RBP eCLIP5.78□□□□□ -1.48
GYPB-205ENST00000505583 VPS18Q9P253 973 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 ZNF624Q9P2J8 865 aaPredicted RBP5.78□□□□□ -1.48
GYPB-205ENST00000505583 CPNE7Q9UBL6 633 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 ANAPC7Q9UJX3 599 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 TP53TG5Q9Y2B4 290 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 MAN2B2Q9Y2E5 1009 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 TTLL3Q9Y4R7 772 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 KCNMB2Q9Y691 235 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 SCINQ9Y6U3 715 aa5.78□□□□□ -1.48
GYPB-205ENST00000505583 MN1Q10571 1320 aaPredicted RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 PCSK5Q92824 1860 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 SPTA1P02549 2419 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 UTP20O75691 2785 aaKnown RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 C1orf232A0A0U1RR37 186 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 A0A1B0GTH6 734 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ANKRD66B4E2M5 251 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 KCNK1O00180 336 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 POLR1CO15160 346 aaPredicted RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 MATN3O15232 486 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CAPN5O15484 640 aaPredicted RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 MTSS1O43312 755 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 GRID2O43424 1007 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 NUAK1O60285 661 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 MTX2O75431 263 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 DNAJB5O75953 348 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TIAF1O95411 115 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 C9P02748 559 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CYP1A2P05177 515 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CCNYL3P0C7X3 344 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 MYBL1P10243 752 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 BRAFP15056 766 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TCN2P20062 427 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CCNCP24863 283 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 NFKBIAP25963 317 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CA5AP35218 305 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 SERPINB6P35237 376 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 GJC1P36383 396 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 DLSTP36957 453 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 SLC19A1P41440 591 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CD86P42081 329 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 SEPHS1P49903 392 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ZNF165P49910 485 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 EPHB1P54762 984 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 EPHA4P54764 986 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 FOXM1Q08050 763 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ABHD18Q0P651 414 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ZBTB17Q13105 803 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 PEX6Q13608 980 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ERV3-1Q14264 604 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 PIGHQ14442 188 aaPredicted RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 KRT81Q14533 505 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 NR1I3Q14994 352 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 SEPT7Q16181 437 aaKnown RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 PLA2G4EQ3MJ16 856 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ANO6Q4KMQ2 910 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ANKRD20A8PQ5CZ79 823 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ALS2CLQ60I27 953 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 PPP1R2P3Q6NXS1 205 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CRTC3Q6UUV7 619 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CEACAM20Q6UY09 585 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 B4GALNT4Q76KP1 1039 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 KDELC2Q7Z4H8 507 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ZNF547Q8IVP9 402 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 DEPDC4Q8N2C3 294 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 BBS5Q8N3I7 341 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 GALNT6Q8NCL4 622 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 GPR26Q8NDV2 337 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 NSMCE1Q8WV22 266 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 APOBEC4Q8WW27 367 aaKnown RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 RSC1A1Q92681 617 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 KIAA1143Q96AT1 154 aaPredicted RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 MIB2Q96AX9 1013 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ELMO2Q96JJ3 720 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 C9orf72Q96LT7 481 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TGM7Q96PF1 710 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TSGA13Q96PP4 275 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 PSMG3-AS1Q96PY0 264 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TEFMQ96QE5 360 aaKnown RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 TRIB3Q96RU7 358 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 RUFY1Q96T51 708 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 HERPUD2Q9BSE4 406 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 NUP85Q9BW27 656 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TRIM55Q9BYV6 548 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CEP41Q9BYV8 373 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ULBP3Q9BZM4 244 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 OR2AG1Q9H205 316 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 FAM83DQ9H4H8 585 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 AKIRIN1Q9H9L7 192 aaPredicted RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 MRPL47Q9HD33 250 aaKnown RBP5.77□□□□□ -1.49
GYPB-205ENST00000505583 KLC4Q9NSK0 619 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TMEM63CQ9P1W3 806 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 ANAPC2Q9UJX6 822 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 CROTQ9UKG9 612 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 TMPRSS11EQ9UL52 423 aa5.77□□□□□ -1.49
GYPB-205ENST00000505583 SHOC2Q9UQ13 582 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms