RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CHRNA5P30532 468 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SHMT1P34896 483 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 MDH1P40925 334 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 MTIF2P46199 727 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 EEFSECP57772 596 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PTENP60484 403 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SRP54P61011 504 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CCNA1P78396 465 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 MRPS34P82930 218 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ITIH3Q06033 890 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 GIT2Q14161 759 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 DOC2BQ14184 412 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 GALNT3Q14435 633 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 MFSD13AQ14CX5 517 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZMYND11Q15326 602 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PPP1R7Q15435 360 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 KCNMB1Q16558 191 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CYP2A13Q16696 494 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 UGCGQ16739 394 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PNLIPRP3Q17RR3 467 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 USH1GQ495M9 461 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PDCD4Q53EL6 469 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZNF789Q5FWF6 425 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 LDLRAP1Q5SW96 308 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZNF618Q5T7W0 954 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 NEK5Q6P3R8 708 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 BRAT1Q6PJG6 821 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ENPP7Q6UWV6 458 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC36A4Q6YBV0 504 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PHLDB2Q86SQ0 1253 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CUZD1Q86UP6 607 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC51AQ86UW1 340 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 WDR5BQ86VZ2 330 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CCDC25Q86WR0 208 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CIR1Q86X95 450 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CDH26Q8IXH8 852 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 C16orf71Q8IYS4 520 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CADM3Q8N126 398 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMEM132CQ8N3T6 1108 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 RASGEF1CQ8N431 466 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZBTB2Q8N680 514 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CLEC1AQ8NC01 280 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ABHD11Q8NFV4 315 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 C9orf43Q8TAL5 461 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 CHURC1Q8WUH1 139 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 FAR1Q8WVX9 515 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SELENOMQ8WWX9 145 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC9A6Q92581 669 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZNF75CPQ92670 426 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 BCL2L2Q92843 193 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 IGSF8Q969P0 613 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 VCPIP1Q96JH7 1222 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PGBD1Q96JS3 809 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 MS4A10Q96PG2 267 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SNX18Q96RF0 628 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SMC6Q96SB8 1091 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLX1AQ9BQ83 275 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 WDR83Q9BRX9 315 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 TBC1D17Q9HA65 648 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 GPR108Q9NPR9 543 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 DDX18Q9NVP1 670 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMOD3Q9NYL9 352 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 NDUFA13Q9P0J0 144 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 DNAJB4Q9UDY4 337 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 FBXO40Q9UH90 709 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PCSK1NQ9UHG2 260 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 FAM153AQ9UHL3 310 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 BAIAP2L1Q9UHR4 511 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 MBD1Q9UIS9 605 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 TRMT6Q9UJA5 497 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 DBNLQ9UJU6 430 aaKnown RBP3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 OAZ3Q9UMX2 235 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 PLA2G4CQ9UP65 541 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 EXOC6BQ9Y2D4 811 aa3.62□□□□□ -1.83
HMGB1P22-201ENST00000505315 A0A1W2PPW3 197 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 PMS2P1A4D2B8 440 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 CXorf65A6NEN9 183 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 DDTLA6NHG4 134 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 LRRIQ4A6NIV6 560 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 HSPB2A8KAH6 182 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 FOXO6A8MYZ6 492 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 KLRF2D3W0D1 207 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 MATN2O00339 956 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 CLDN4O14493 209 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 VCYO14598 125 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 PRYO14603 147 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC16A5O15375 505 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 MAGEB3O15480 346 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 PPIP5K2O43314 1243 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 KIF1CO43896 1103 aaKnown RBP3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 TSPAN1O60635 241 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 DAB1O75553 588 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 RAD51DO75771 328 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 SCAF4O95104 1147 aaKnown RBP3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 EPN2O95208 641 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 GH2P01242 217 aa3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 PLA2G1BP04054 148 aaKnown RBP3.61□□□□□ -1.83
HMGB1P22-201ENST00000505315 CHRM2P08172 466 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms