RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 A0A1W2PQ09 198 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 A8MZ25 164 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 B4DLN1 442 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 WNT9BO14905 357 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 PLRG1O43660 514 aaKnown RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 OR2C1O95371 312 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 NGFRP08138 427 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 SRPRAP08240 638 aaKnown RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 DDX5P17844 614 aaKnown RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 GABRB1P18505 474 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 UBA7P41226 1012 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 PEX5P50542 639 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 MRPL12P52815 198 aaKnown RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 MFAP4P55083 255 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 TAS2R40P59535 323 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 CSNK2A1P68400 391 aaPredicted RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 BNC1Q01954 994 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 FOXM1Q08050 763 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 TRAF2Q12933 501 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 TRAF3Q13114 568 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 MYBPHQ13203 477 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 ADIPOQQ15848 244 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 PNLIPRP3Q17RR3 467 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 KRT24Q2M2I5 525 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 ASTE1Q2TB18 679 aaPredicted RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 ATP13A5Q4VNC0 1218 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 KCNT1Q5JUK3 1230 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 RHBDF2Q6PJF5 856 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 CACNA2D4Q7Z3S7 1137 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 UNC5CLQ8IV45 518 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 FOXRED2Q8IWF2 684 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 ADHFE1Q8IWW8 467 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 RPAP2Q8IXW5 612 aaPredicted RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 HJURPQ8NCD3 748 aaPredicted RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 CSNK2A3Q8NEV1 391 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 OR2AK2Q8NG84 335 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 B4GALNT2Q8NHY0 566 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 ELP5Q8TE02 316 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 FAM216AQ8WUB2 273 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 ZNF479Q96JC4 524 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 PPP1R13BQ96KQ4 1090 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 SMC6Q96SB8 1091 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 FIZ1Q96SL8 496 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 SH3GL2Q99962 352 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 TMEM204Q9BSN7 226 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 WACQ9BTA9 647 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 MXD3Q9BW11 206 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 CCDC68Q9H2F9 335 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 NSMCE4AQ9NXX6 385 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 TERF2IPQ9NYB0 399 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 SWAP70Q9UH65 585 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 CLIC4Q9Y696 253 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 AHDC1Q5TGY3 1603 aaPredicted RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 PNPLA6Q8IY17 1366 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 PLEKHG1Q9ULL1 1385 aa3.21□□□□□ -1.9
RFC1-209ENST00000504974 NKTRP30414 1462 aaKnown RBP3.21□□□□□ -1.9
RFC1-209ENST00000504974 PPLO60437 1756 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 RIMS2Q9UQ26 1411 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 NCOA3Q9Y6Q9 1424 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 NEXMIFQ5QGS0 1516 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 NHSL1Q5SYE7 1610 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 NRXN3Q9Y4C0 1643 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 IGLV5-52A0A0A0MRZ9 124 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 AGAP14A8MT82 685 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 A8MV72 311 aaPredicted RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 K7ENM7 598 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 M0QZ24 198 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CTDSP2O14595 271 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 SCAMP1O15126 338 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 SPINT2O43291 252 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 KDM4BO94953 1096 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 PAPSS2O95340 614 aaPredicted RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 AFPP02771 609 aaKnown RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 CSH1P0DML2 217 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CSH2P0DML3 217 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 PORP16435 677 aaPredicted RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 UBA1P22314 1058 aaKnown RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 RRM1P23921 792 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 PSMB10P40306 273 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 PDLIM4P50479 330 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CLCNKAP51800 687 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 MRPS34P82930 218 aaKnown RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 ZBED6P86452 979 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 EGR4Q05215 589 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 GRSF1Q12849 480 aaKnown RBP eCLIP3.2□□□□□ -1.9
RFC1-209ENST00000504974 IRF3Q14653 427 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CALCRLQ16602 461 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 DUSP28Q4G0W2 176 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 ZNF805Q5CZA5 627 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CFAP58Q5T655 872 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 FAM69BQ5VUD6 431 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 TMEM198Q66K66 360 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 PLEKHA7Q6IQ23 1121 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 KRBA2Q6ZNG9 492 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CREB3L2Q70SY1 520 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 CCDC190Q86UF4 302 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 RNF168Q8IYW5 571 aaPredicted RBP3.2□□□□□ -1.9
RFC1-209ENST00000504974 TMTC2Q8N394 836 aa3.2□□□□□ -1.9
RFC1-209ENST00000504974 IQCF1Q8N6M8 205 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms