RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MRGPREQ86SM8 312 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 ZDHHC17Q8IUH5 632 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 TRIM48Q8IWZ4 208 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 DSELQ8IZU8 1212 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 TTC30BQ8N4P2 665 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 AVL9Q8NBF6 648 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 DNAJB14Q8TBM8 379 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 PPP4R1Q8TF05 950 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 MTFMTQ96DP5 389 aaKnown RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 ZDHHC12Q96GR4 267 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 SLC41A2Q96JW4 573 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 NSMCE3Q96MG7 304 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 TSG101Q99816 390 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 FN1P02751 2386 aaKnown RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 FBN1P35555 2871 aaKnown RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 AKAP6Q13023 2319 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 A0A0U1RQS6 177 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 A0A1B0GVL5 298 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 BECN2A8MW95 431 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 J3KR12 359 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 MEN1O00255 615 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 CAPN1P07384 714 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 ADRA1BP35368 520 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 DPTQ07507 201 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 GTF3C1Q12789 2109 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 CUL4AQ13619 759 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 ZNF169Q14929 603 aaPredicted RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 PTPRRQ15256 657 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 CDSNQ15517 529 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 GPR19Q15760 415 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 SKOR2Q2VWA4 1001 aaPredicted RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 PLEKHS1Q5SXH7 462 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 MTFR2Q6P444 385 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 TSPAN33Q86UF1 283 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 BPHLQ86WA6 291 aaPredicted RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 RTL3Q8N8U3 475 aaKnown RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 CHDHQ8NE62 594 aaPredicted RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 SPATA3Q8NHX4 192 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 FER1L6-AS2Q96M78 137 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 AGAP2Q99490 1192 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 OSGEPL1Q9H4B0 414 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 PDFQ9HBH1 243 aa12.3□□□□□ -0.44
LSM6-204ENST00000504181 INTS1Q8N201 2190 aaKnown RBP12.3□□□□□ -0.44
LSM6-204ENST00000504181 TRIM49BA6NDI0 452 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 GOLGA8SH3BPF8 625 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 CREB3O43889 395 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 C8BP07358 591 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 PFKFB1P16118 471 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 XRCC1P18887 633 aaPredicted RBP12.29□□□□□ -0.44
LSM6-204ENST00000504181 SLC19A1P41440 591 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 CSNK1DP48730 415 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 ARL4DP49703 201 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 TDGF1P3P51864 188 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 IST1P53990 364 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 YBEYP58557 167 aaPredicted RBP12.29□□□□□ -0.44
LSM6-204ENST00000504181 ADORA2A-AS1P86434 159 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
LSM6-204ENST00000504181 PARP15Q460N3 678 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 GJB7Q6PEY0 223 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 GFRALQ6UXV0 394 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 CXXC5Q7LFL8 322 aaKnown RBP12.29□□□□□ -0.44
LSM6-204ENST00000504181 PRIMA1Q86XR5 153 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 BCORP1Q8N888 145 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 UBXN4Q92575 508 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 SCAMP4Q969E2 229 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 AP2M1Q96CW1 435 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 COX14Q96I36 57 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
LSM6-204ENST00000504181 ABCG8Q9H221 673 aa12.29□□□□□ -0.44
LSM6-204ENST00000504181 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 NPIPB15A6NHN6 443 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 PSMD11O00231 422 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 PCDH17O14917 1159 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 FANCGO15287 622 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 P4HA2O15460 535 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 LDB2O43679 373 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 CPP00450 1065 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 JCHAINP01591 159 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 PRCPP42785 496 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 SCNN1BP51168 640 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 NCF4Q15080 339 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 C15orf59Q2T9L4 293 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 C2CD6Q53TS8 623 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 FOXD4L5Q5VV16 416 aaPredicted RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 FCRL6Q6DN72 434 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 MEX3BQ6ZN04 569 aaKnown RBP12.28□□□□□ -0.44
LSM6-204ENST00000504181 TECPR1Q7Z6L1 1165 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 PHYKPLQ8IUZ5 450 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 SYTL1Q8IYJ3 562 aa12.28□□□□□ -0.44
LSM6-204ENST00000504181 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms