RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TYRP1P17643 537 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CTPS1P17812 591 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 HOXA5P20719 270 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 KRT9P35527 623 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ADCY8P40145 1251 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ETV3P41162 512 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 TSPAN7P41732 249 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SYKP43405 635 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NOP2P46087 812 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 LEPRP48357 1165 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 RPL34P49207 117 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 CXCR3P49682 368 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 PEX5P50542 639 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 FOXL2P58012 376 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CDK3Q00526 305 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 MC2RQ01718 297 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 MC1RQ01726 317 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 HHEXQ03014 270 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ELP6Q0PNE2 266 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 KCNAB1Q14722 419 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NR1D2Q14995 579 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SEPT7Q16181 437 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 CNGA3Q16281 694 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 C5orf22Q49AR2 442 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 BRMS1LQ5PSV4 323 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 MANEALQ5VSG8 457 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 PRAMEF17Q5VTA0 474 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CRYBG3Q68DQ2 2970 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 JMJD6Q6NYC1 403 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 ERAP2Q6P179 960 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 TMEM71Q6P5X7 295 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 C6orf15Q6UXA7 325 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 CERS6Q6ZMG9 384 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 FAM92BQ6ZTR7 304 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SLC26A9Q7LBE3 791 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 TMEM110Q86TL2 294 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 TSPAN33Q86UF1 283 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SLC47A2Q86VL8 602 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 FJX1Q86VR8 437 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NLRP14Q86W24 1093 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 MMP21Q8N119 569 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CISD2Q8N5K1 135 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 ESX1Q8N693 406 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 RBMXL3Q8N7X1 1067 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 FDCSPQ8NFU4 85 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 OR10G6Q8NH81 332 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ATL2Q8NHH9 583 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 LMO3Q8TAP4 145 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 STK32AQ8WU08 396 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ZNF606Q8WXB4 792 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ASB12Q8WXK4 309 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SNRNP40Q96DI7 357 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 TBC1D31Q96DN5 1066 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 C20orf173Q96LM9 149 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NSMCE3Q96MG7 304 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 OR6C1Q96RD1 312 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SRRTQ9BXP5 876 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 FRMD8Q9BZ67 464 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 ASPSCR1Q9BZE9 553 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 TTYH3Q9C0H2 523 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CLEC4MQ9H2X3 399 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 OSGEPL1Q9H4B0 414 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NOL6Q9H6R4 1146 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 UPF2Q9HAU5 1272 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 METTL14Q9HCE5 456 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 ARFGAP3Q9NP61 516 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 UBE2TQ9NPD8 197 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 GPATCH2LQ9NWQ4 482 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.6□□□□□ -1.83
USP46-205ENST00000504078 UBA2Q9UBT2 640 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 B4GALT6Q9UBX8 382 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SH3BGRL2Q9UJC5 107 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 KIAA1257Q9ULG3 409 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 STAP1Q9ULZ2 295 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NTNG1Q9Y2I2 539 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 TMEM184BQ9Y519 407 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 CSAG2Q9Y5P2 127 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 DGKBQ9Y6T7 804 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 MED13Q9UHV7 2174 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ADGRG4Q8IZF6 3080 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 UNC13CQ8NB66 2214 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CREBBPQ92793 2442 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 DOPEY1Q5JWR5 2465 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 DNHD1Q96M86 4753 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 LRBAP50851 2863 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 CELSR1Q9NYQ6 3014 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TSPAN11A1L157 253 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 ZSCAN5CA6NGD5 496 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 DRGXA6NNA5 263 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TMEM110-MUSTN1A8MSY1 372 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 RASA4BC9J798 803 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 J3KR12 359 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 RASA4O43374 803 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 HNRNPRO43390 633 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 CREB3O43889 395 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 TNFRSF21O75509 655 aa3.59□□□□□ -1.83
USP46-205ENST00000504078 NADKO95544 446 aaPredicted RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 POP4O95707 220 aaKnown RBP3.59□□□□□ -1.83
USP46-205ENST00000504078 CPP00450 1065 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms