RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF446Q9NWS9 450 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 SLC24A2Q9UI40 661 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 VPS9D1Q9Y2B5 631 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 IGLV3-16A0A075B6K0 115 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 UBA6A0AVT1 1052 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 IVLP07476 585 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZNF7P17097 686 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 AKT1P31749 480 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 CD151P48509 253 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 PFN3P60673 137 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 B4GALNT1Q00973 533 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 ITIH4Q14624 930 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 PMS2CLQ68D20 193 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZC3HC1Q86WB0 502 aaKnown RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 NAT14Q8WUY8 206 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 DNASE2BQ8WZ79 361 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 ATXN7L3BQ96GX2 97 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 ROPN1BQ9BZX4 212 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 MIR1-1HGQ9H1L0 117 aa20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 ROPN1Q9HAT0 212 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 PHPT1Q9NRX4 125 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 OAS3Q9Y6K5 1087 aaKnown RBP20.19■□□□□ 0.82
CDC42SE2-206ENST00000503291 TLDC2A0PJX2 215 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 SMIM23A6NLE4 172 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 RASGRF2O14827 1237 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 NSG1P42857 185 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 CSE1LP55060 971 aaKnown RBP20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZNF844Q08AG5 666 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 TMEM115Q12893 351 aaPredicted RBP20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 PLK5Q496M5 336 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 ADGRD1Q6QNK2 874 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 LRIG3Q6UXM1 1119 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 ABI3BPQ7Z7G0 1075 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 RGL4Q8IZJ4 473 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 CLDN19Q8N6F1 224 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 DCUN1D1Q96GG9 259 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 SLC6A18Q96N87 628 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 RBBP8Q99708 897 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 TMEM109Q9BVC6 243 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 PPCSQ9HAB8 311 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZNF180Q9UJW8 692 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 SDK1Q7Z5N4 2213 aa20.18■□□□□ 0.82
CDC42SE2-206ENST00000503291 PRMT5O14744 637 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 MYCLP1P12525 358 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 MSH3P20585 1137 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 CEP68Q76N32 757 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 HEXDCQ8WVB3 486 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 RHOJQ9H4E5 214 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 AASDHPPTQ9NRN7 309 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 TMEM98Q9Y2Y6 226 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 PCDHGA2Q9Y5H1 932 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 A6NNZ2 444 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 CACNB4O00305 520 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 RALBP11234 206 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 FMO4P31512 558 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 SPRP35270 261 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 DHPSP49366 369 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 ADARP55265 1226 aaKnown RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 PDE1CQ14123 709 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 WDR45BQ5MNZ6 344 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 KYAT3Q6YP21 454 aaKnown RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 Q6ZSR6 202 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 ADGRG6Q86SQ4 1221 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 TDRPQ86YL5 185 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 C1orf216Q8TAB5 229 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 VPS39Q96JC1 886 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZC3H10Q96K80 434 aaKnown RBP20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 BIRC8Q96P09 236 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 LRFN3Q9BTN0 628 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 CLPBQ9H078 707 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 OR2AG1Q9H205 316 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 P2RY12Q9H244 342 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 VIPAS39Q9H9C1 493 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 ATXN10Q9UBB4 475 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 CTNNAL1Q9UBT7 734 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 TBK1Q9UHD2 729 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 PRSS21Q9Y6M0 314 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 USP34Q70CQ2 3546 aa20.17■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZNF318Q5VUA4 2279 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 CFAP99D6REC4 459 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 MAP2K7O14733 419 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 SASH3O75995 380 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 CDK14O94921 469 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 ASMTLO95671 621 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 HOXC4P09017 264 aaPredicted RBP20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 ATP1B2P14415 290 aaPredicted RBP20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 ITPKAP23677 461 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 LIMK2P53671 638 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 YPEL5P62699 121 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 CEP85LQ5SZL2 805 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 ZNF549Q6P9A3 640 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 DET1Q7L5Y6 550 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 RASGEF1AQ8N9B8 481 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 OR13H1Q8NG92 308 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 SGF29Q96ES7 293 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 PSMC3IPQ9P2W1 217 aaPredicted RBP20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 CUL9Q8IWT3 2517 aa20.16■□□□□ 0.82
CDC42SE2-206ENST00000503291 TOR1BO14657 336 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 VEGFDO43915 354 aa20.15■□□□□ 0.82
CDC42SE2-206ENST00000503291 CDH16O75309 829 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms