RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CWC15Q9P013 229 aaKnown RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 MARCH4Q9P2E8 410 aaPredicted RBP2.38□□□□□ -2.03
SMAD1-203ENST00000502342 SMCHD1A6NHR9 2005 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ZCWPW2A0A1B0GU75 182 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 KANSL1LA0AUZ9 987 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 OR5K3A6NET4 321 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 PMS2P5A8MQ11 134 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ATP2A1O14983 1001 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ZBTB43O43298 467 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 CCNDBP1O95273 360 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 PAK4O96013 591 aaPredicted RBP2.37□□□□□ -2.03
SMAD1-203ENST00000502342 CGAP01215 116 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 IGHV4-39P01824 125 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ICAM1P05362 532 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 KRT19P08727 400 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 FGF5P12034 268 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ZNF23P17027 643 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TIMP3P35625 211 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 MLLT10P55197 1068 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 HILS1P60008 231 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 RPL24P83731 157 aaKnown RBP2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TFAP4Q01664 338 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 NIPAL4Q0D2K0 466 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 LRMPQ12912 555 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ACVR2BQ13705 512 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ADIPOQQ15848 244 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 KRTCAP3Q53RY4 240 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 LRIF1Q5T3J3 769 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 SFMBT2Q5VUG0 894 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 JAKMIP3Q5VZ66 844 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 NSUN5P2Q63ZY6 315 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 SLC35E4Q6ICL7 350 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 ADAM5Q6NVV9 412 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 PAPD4Q6PIY7 484 aaKnown RBP2.37□□□□□ -2.03
SMAD1-203ENST00000502342 NRROSQ86YC3 692 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TMTC2Q8N394 836 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 SLC5A8Q8N695 610 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 EMC1Q8N766 993 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 IL17REQ8NFR9 667 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 GSDMBQ8TAX9 411 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 UCMAQ8WVF2 138 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 SGCDQ92629 289 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 PHF21AQ96BD5 680 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 SCRN2Q96FV2 425 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 PPM1MQ96MI6 270 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 NCAPGQ9BPX3 1015 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM39BQ9GZU3 492 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TFB2MQ9H5Q4 396 aaKnown RBP2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TRPC7Q9HCX4 862 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 DIAPH3Q9NSV4 1193 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 DDX43Q9NXZ2 648 aaKnown RBP2.37□□□□□ -2.03
SMAD1-203ENST00000502342 KLHL9Q9P2J3 617 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 UBA2Q9UBT2 640 aaPredicted RBP2.37□□□□□ -2.03
SMAD1-203ENST00000502342 PGAP2Q9UHJ9 254 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 MTMR6Q9Y217 621 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM98Q9Y2Y6 226 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 JRKLQ9Y4A0 524 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 CLIC4Q9Y696 253 aa2.37□□□□□ -2.03
SMAD1-203ENST00000502342 CCDC189A1A4V9 331 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 ANKRD66B4E2M5 251 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM178BH3BS89 294 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 PLPP2O43688 288 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 BUD23O43709 281 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 CREB3O43889 395 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 ZG16O60844 167 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 CTSVO60911 334 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 RNASEH2AO75792 299 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 BMP10O95393 424 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 HIST1H2ABP04908 130 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 EIF2S1P05198 315 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 CLEC3BP05452 202 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 PAX1P15863 534 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM11P17152 192 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 GM2AP17900 193 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 HIST1H2ADP20671 130 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 AHRP35869 848 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 GLIPR1P48060 266 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 ATP12AP54707 1039 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 MRPS34P82930 218 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 CCNYL2Q5T2Q4 361 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 HAUS3Q68CZ6 603 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 CCDC70Q6NSX1 233 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 HIST3H2AQ7L7L0 130 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 LONP2Q86WA8 852 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 TEX11Q8IYF3 940 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 RNF168Q8IYW5 571 aaPredicted RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 RASGEF1CQ8N431 466 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 GBGT1Q8N5D6 347 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 STPG4Q8N801 248 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 RBM15BQ8NDT2 890 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 OR10V1Q8NGI7 309 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 TDRD7Q8NHU6 1098 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 POMGNT1Q8WZA1 660 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 ARHGEF2Q92974 986 aaKnown RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 OXNAD1Q96HP4 312 aaPredicted RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 ABHD8Q96I13 439 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 F2RL3Q96RI0 385 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 NUDCD1Q96RS6 583 aa2.36□□□□□ -2.03
SMAD1-203ENST00000502342 SEPT5Q99719 369 aaPredicted RBP2.36□□□□□ -2.03
SMAD1-203ENST00000502342 BARHL1Q9BZE3 327 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms