RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 GSDMCQ9BYG8 508 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 RMI1Q9H9A7 625 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 TRIM39Q9HCM9 518 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 SMOXQ9NWM0 555 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 TMPRSS11EQ9UL52 423 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 DOLKQ9UPQ8 538 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 KCTD3Q9Y597 815 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ST14Q9Y5Y6 855 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 CTAGE9A4FU28 777 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 GPR39O43194 453 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 NUAK1O60285 661 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 PRAMEF1O95521 474 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 GP1BAP07359 652 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 CDK4P11802 303 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 TPH1P17752 444 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 COILP38432 576 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 HADHAP40939 763 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 LMAN1P49257 510 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 FNTAP49354 379 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 CTBSQ01459 385 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 ITGA9Q13797 1035 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 POU6F1Q14863 301 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 NR0B2Q15466 257 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 CHRNA6Q15825 494 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 KHDC1Q4VXA5 237 aaKnown RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 CCDC137Q6PK04 289 aaKnown RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 PPP1R21Q6ZMI0 780 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 TAF8Q7Z7C8 310 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 NRROSQ86YC3 692 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 C17orf53Q8N3J3 647 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 KYQ8NBH2 561 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 DDHD1Q8NEL9 900 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 OR13C4Q8NGS5 318 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 CCL4L1Q8NHW4 92 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 GLMNQ92990 594 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 SUDS3Q9H7L9 328 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 CASS4Q9NQ75 786 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 PIH1D1Q9NWS0 290 aaKnown RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 ATXN10Q9UBB4 475 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 GPR34Q9UPC5 381 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 PCYT1BQ9Y5K3 369 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-208ENST00000497892 SAR1BQ9Y6B6 198 aa11.12□□□□□ -0.63
ERCC8-208ENST00000497892 COL27A1Q8IZC6 1860 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ASXL3Q9C0F0 2248 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 MROH6A6NGR9 719 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 AGAP14A8MT82 685 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 H7C0S8 307 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 CHUKO15111 745 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 HYAL3O43820 417 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 VEGFDO43915 354 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 WFS1O76024 890 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 SRP72O76094 671 aaKnown RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 GAS8O95995 478 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 MYF5P13349 255 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF8P17098 575 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 TPSB2P20231 275 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 PSMA3P25788 255 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 GRIA1P42261 906 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 MAGEA6P43360 314 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 DUSP3P51452 185 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 XIAPP98170 497 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 NFATC2Q13469 925 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 SEPT6Q14141 434 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 TPSAB1Q15661 275 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 CCDC157Q569K6 752 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF648Q5T619 568 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 GPRC6AQ5T6X5 926 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 GUSBP11Q6P575 273 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 OGFOD3Q6PK18 319 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 SLC30A9Q6PML9 568 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 DHRS13Q6UX07 377 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ADGRG6Q86SQ4 1221 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 CREG2Q8IUH2 290 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 CHCHD4Q8N4Q1 142 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 DNAAF3Q8N9W5 541 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 FAM46DQ8NEK8 389 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 GPR156Q8NFN8 814 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 NAT6Q93015 286 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ZCCHC2Q9C0B9 1178 aaKnown RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 OR2AG1Q9H205 316 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 NLE1Q9NVX2 485 aaPredicted RBP11.11□□□□□ -0.63
ERCC8-208ENST00000497892 TAAR2Q9P1P5 351 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ANGPTL2Q9UKU9 493 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 NEU2Q9Y3R4 380 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 PRKAB1Q9Y478 270 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 ACACBO00763 2458 aa11.11□□□□□ -0.63
ERCC8-208ENST00000497892 RP1P56715 2156 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 HEATR9A2RTY3 570 aa11.1□□□□□ -0.63
ERCC8-208ENST00000497892 EME2A4GXA9 379 aaPredicted RBP11.1□□□□□ -0.63
ERCC8-208ENST00000497892 B4DGG1 531 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms