RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 KCNN4O15554 427 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 PLRG1O43660 514 aaKnown RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 GLUD1P00367 558 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 VPREB1P12018 145 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 SRCP12931 536 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 PRLRP16471 622 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 GLUD2P49448 558 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 SUOXP51687 545 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 CLCNKAP51800 687 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 UBXN2AP68543 259 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 ABATP80404 500 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 TMF1P82094 1093 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 Q0VFX4 171 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 KYNUQ16719 465 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 ATP13A5Q4VNC0 1218 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 IGSF11Q5DX21 431 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 ERMARDQ5T6L9 678 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 KRT80Q6KB66 452 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 MEPCEQ7L2J0 689 aaKnown RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 KRT77Q7Z794 578 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 PCDH20Q8N6Y1 951 aaKnown RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 PRR26Q8N8Z3 221 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 GSDMBQ8TAX9 411 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 DUSP19Q8WTR2 217 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 PTPMT1Q8WUK0 201 aaPredicted RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 MIB2Q96AX9 1013 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 ZNF653Q96CK0 615 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 MTBPQ96DY7 904 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 ZNF479Q96JC4 524 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 DGAT2Q96PD7 388 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 OR10A4Q9H209 315 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 HIPK2Q9H2X6 1198 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 PCDH9Q9HC56 1237 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 TRMT1Q9NXH9 659 aaKnown RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 MCM9Q9NXL9 1143 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 AMACRQ9UHK6 382 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 TINAGQ9UJW2 476 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 ZHX1Q9UKY1 873 aaPredicted RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 MYO6Q9UM54 1294 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 PCDHA7Q9UN72 937 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 LOXL2Q9Y4K0 774 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 TMEM184BQ9Y519 407 aaPredicted RBP3.99□□□□□ -1.77
SMC4-225ENST00000497203 H0YIN7 160 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 SOCS6O14544 535 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 IKBKBO14920 756 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 KCNJ13O60928 360 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 RSL1D1O76021 490 aaKnown RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 IGHV4-30-4P0DP06 118 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 GJA1P17302 382 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 UGT1A1P22309 533 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 TAS2R38P59533 333 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 SIRPAP78324 504 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 MVPQ14764 893 aaKnown RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 HLFQ16534 295 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 SPECC1Q5M775 1068 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 NSUN5P2Q63ZY6 315 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 LCN10Q6JVE6 187 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 PAPD4Q6PIY7 484 aaKnown RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 INTS8Q75QN2 995 aaKnown RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 HAUS6Q7Z4H7 955 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 GPR180Q86V85 440 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 FJX1Q86VR8 437 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 FOXRED2Q8IWF2 684 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 EMC1Q8N766 993 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 TSPAN14Q8NG11 270 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 THAP6Q8TBB0 222 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 WASF1Q92558 559 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 PGAP3Q96FM1 320 aaPredicted RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 OR1F2PQ96R84 312 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 SEMA3CQ99985 751 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 ZPBPQ9BS86 351 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 CCDC106Q9BWC9 280 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 RAD21L1Q9H4I0 556 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 ERVMER34-1Q9H9K5 563 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 SEBOXQ9HB31 216 aaPredicted RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 CCDC177Q9NQR7 707 aaPredicted RBP3.98□□□□□ -1.77
SMC4-225ENST00000497203 BCCIPQ9P287 314 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMC4-225ENST00000497203 ANAPC2Q9UJX6 822 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 FBXL2Q9UKC9 423 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 TRPV2Q9Y5S1 764 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 TAF1P21675 1872 aa3.98□□□□□ -1.77
SMC4-225ENST00000497203 MAGEB17A8MXT2 336 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 CLGNO14967 610 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 RFPL2O75678 378 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 PRSS2P07478 247 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 NGFRP08138 427 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 MYBL1P10243 752 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 PLA2G2AP14555 144 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 NR2F2P24468 414 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 APOBEC1P41238 236 aaKnown RBP3.97□□□□□ -1.77
SMC4-225ENST00000497203 PEX5P50542 639 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 SNTB1Q13884 538 aaKnown RBP3.97□□□□□ -1.77
SMC4-225ENST00000497203 PLCB4Q15147 1175 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 DLG2Q15700 870 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 CALCRLQ16602 461 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 MEP1AQ16819 746 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 KCNT1Q5JUK3 1230 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 FAM69BQ5VUD6 431 aa3.97□□□□□ -1.77
SMC4-225ENST00000497203 ZDHHC20Q5W0Z9 365 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms