RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CDK14O94921 469 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 LDOC1O95751 146 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-212ENST00000495497 ANXA6P08133 673 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 MLNP12872 115 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 ITGALP20701 1170 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 RPL21P46778 160 aaKnown RBP19.21■□□□□ 0.67
HDAC4-212ENST00000495497 ITGA8P53708 1063 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 LAMB3Q13751 1172 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 TRIP6Q15654 476 aaKnown RBP19.21■□□□□ 0.67
HDAC4-212ENST00000495497 PLA2G4EQ3MJ16 856 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 LDLRAP1Q5SW96 308 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 CRTC3Q6UUV7 619 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 CHST15Q7LFX5 561 aaPredicted RBP19.21■□□□□ 0.67
HDAC4-212ENST00000495497 NLRP9Q7RTR0 991 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 TAS2R42Q7RTR8 314 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 PCGF5Q86SE9 256 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 SFTPA2Q8IWL1 248 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 PIANPQ8IYJ0 282 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 DDHD1Q8NEL9 900 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 PWWP2AQ96N64 755 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 DPH5Q9H2P9 285 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 XAB2Q9HCS7 855 aaKnown RBP19.21■□□□□ 0.67
HDAC4-212ENST00000495497 SMOXQ9NWM0 555 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 FTSJ1Q9UET6 329 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 RIMKLBQ9ULI2 386 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 DOLKQ9UPQ8 538 aa19.21■□□□□ 0.67
HDAC4-212ENST00000495497 FAM187AA6NFU0 413 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 AGAP14A8MT82 685 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 GOT2P00505 430 aaKnown RBP19.2■□□□□ 0.66
HDAC4-212ENST00000495497 ALPPL2P10696 532 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 CEACAM1P13688 526 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 AKT1P31749 480 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 MAGEA3P43357 314 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 ACVR1Q04771 509 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 DNAJC3Q13217 504 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 SMAD1Q15797 465 aaKnown RBP19.2■□□□□ 0.66
HDAC4-212ENST00000495497 FNBP1LQ5T0N5 605 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 HIBCHQ6NVY1 386 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-212ENST00000495497 CASC4Q6P4E1 433 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 SLC30A9Q6PML9 568 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 DET1Q7L5Y6 550 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 MAATS1Q7Z4T9 603 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 HOOK3Q86VS8 718 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 GKN2Q86XP6 184 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 RASGEF1AQ8N9B8 481 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 OR6P1Q8NGX9 317 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 GPBAR1Q8TDU6 330 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 MFSD3Q96ES6 412 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 SNF8Q96H20 258 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 KIFC1Q9BW19 673 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 TREX1Q9NSU2 369 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 TRNAU1APQ9NX07 287 aaKnown RBP19.2■□□□□ 0.66
HDAC4-212ENST00000495497 SIRPGQ9P1W8 387 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 SOX13Q9UN79 622 aa19.2■□□□□ 0.66
HDAC4-212ENST00000495497 BPTFQ12830 3046 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 TRBV5-4A0A0C4DH59 114 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 SDR42E2A6NKP2 422 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 CHUKO15111 745 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 VEGFDO43915 354 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 SEC31AO94979 1220 aaKnown RBP19.19■□□□□ 0.66
HDAC4-212ENST00000495497 ACP5P13686 325 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 MSH3P20585 1137 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 FOXN2P32314 431 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 CTSCP53634 463 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 B4GALNT1Q00973 533 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 CACNG1Q06432 222 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 ILF3Q12906 894 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDAC4-212ENST00000495497 PROX2Q3B8N5 592 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 MSS51Q4VC12 460 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 PPM1JQ5JR12 505 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 TMEM220Q6QAJ8 160 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 SERPINA9Q86WD7 417 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 ZNF547Q8IVP9 402 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 NXPE1Q8N323 547 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 FAM46DQ8NEK8 389 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 ULK4Q96C45 1275 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 SIGLEC10Q96LC7 697 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 APOLD1Q96LR9 279 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 TTC25Q96NG3 672 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 CDC6Q99741 560 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 ERP44Q9BS26 406 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 BOCQ9BWV1 1114 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 GSDMCQ9BYG8 508 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 RMI1Q9H9A7 625 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 SPATS2LQ9NUQ6 558 aaKnown RBP19.19■□□□□ 0.66
HDAC4-212ENST00000495497 SLC23A2Q9UGH3 650 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 ANAPC5Q9UJX4 755 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 GPR34Q9UPC5 381 aa19.19■□□□□ 0.66
HDAC4-212ENST00000495497 DCHS1Q96JQ0 3298 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 LY6G6EA0A0G2JKS1 128 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 OR2AG2A6NM03 316 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 TPP1O14773 563 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 TP73O15350 636 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 ACTR1BP42025 376 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 ACTR1AP61163 376 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 PRAMEP78395 509 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 SIM1P81133 766 aaPredicted RBP19.18■□□□□ 0.66
HDAC4-212ENST00000495497 DHX9Q08211 1270 aaKnown RBP19.18■□□□□ 0.66
HDAC4-212ENST00000495497 GTF2H3Q13889 308 aa19.18■□□□□ 0.66
HDAC4-212ENST00000495497 MORF4L2Q15014 288 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms