RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 ZFPL1O95159 310 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CTDNEP1O95476 244 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 LCN1P31025 176 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PIK3CBP42338 1070 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 LIG4P49917 911 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PGDP52209 483 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 RTP1P59025 263 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ERVFC1P60507 584 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 AP1S1P61966 158 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 FKBP1AP62942 108 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 MGAT5Q09328 741 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 RASGEF1BQ0VAM2 473 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 STX1AQ16623 288 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 SLC5A12Q1EHB4 618 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ZNF468Q5VIY5 522 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 FBXO46Q6PJ61 603 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 GPRIN3Q6ZVF9 776 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 MON1AQ86VX9 555 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 RASAL3Q86YV0 1011 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CMTR2Q8IYT2 770 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 MB21D1Q8N884 522 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CATSPER1Q8NEC5 780 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CD300LFQ8TDQ1 290 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ISG20Q96AZ6 181 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 CCT8L2Q96SF2 557 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ACO2Q99798 780 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 DUSP26Q9BV47 211 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PABPC3Q9H361 631 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 C11orf49Q9H6J7 331 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 KLHL1Q9NR64 748 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 POU2F3Q9UKI9 436 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CA14Q9ULX7 337 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 COL1A1P02452 1464 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 MYO5AQ9Y4I1 1855 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 MROH7Q68CQ1 1323 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 STK36Q9NRP7 1315 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 A0A0B4J293 547 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PRR23D1E9PI22 279 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 NEMP1O14524 444 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 TNPO2O14787 897 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 FOXN1O15353 648 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 GPAA1O43292 621 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PRKD3O94806 890 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ONECUT2O95948 504 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PRR23D2P0DMB1 279 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 TCF4P15884 667 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PTPN1P18031 435 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 WARSP23381 471 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 RPS12P25398 132 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 THBS2P35442 1172 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CDC34P49427 236 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 ZNF75DP51815 510 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 MADCAM1Q13477 382 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ALKBH1Q13686 389 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 HSDL1Q3SXM5 330 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 MPP7Q5T2T1 576 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CDC73Q6P1J9 531 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 OTOAQ7RTW8 1153 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ADGRF2Q8IZF7 708 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ZNF786Q8N393 782 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PNMA1Q8ND90 353 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 OR10J5Q8NHC4 309 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PPP1R35Q8TAP8 253 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 NANPQ8TBE9 248 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 BTN2A2Q8WVV5 523 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 RNF31Q96EP0 1072 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 CITED4Q96RK1 184 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 TP63Q9H3D4 680 aaPredicted RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 EXO5Q9H790 373 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 FOLH1BQ9HBA9 442 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 RAVER2Q9HCJ3 691 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.28□□□□□ -0.92
RPSA-209ENST00000495394 DDX19AQ9NUU7 478 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 COA4Q9NYJ1 87 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 USP36Q9P275 1121 aaKnown RBP9.28□□□□□ -0.92
RPSA-209ENST00000495394 DNAJC12Q9UKB3 198 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 STAP1Q9ULZ2 295 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PLAGL2Q9UPG8 496 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 PASKQ96RG2 1323 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 ECM29Q5VYK3 1845 aa9.28□□□□□ -0.92
RPSA-209ENST00000495394 A6NL46 340 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 ZNF729A6NN14 1252 aaPredicted RBP9.27□□□□□ -0.93
RPSA-209ENST00000495394 ZNF716A6NP11 495 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 CIB2O75838 187 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 DDNO94850 711 aaPredicted RBP9.27□□□□□ -0.93
RPSA-209ENST00000495394 SORBS2O94875 1100 aaKnown RBP9.27□□□□□ -0.93
RPSA-209ENST00000495394 DKK1O94907 266 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 ZNF735P0CB33 412 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 CSH1P0DML2 217 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 CSH2P0DML3 217 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 CAPGP40121 348 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 BUD31P41223 144 aaPredicted RBP9.27□□□□□ -0.93
RPSA-209ENST00000495394 GRIA4P48058 902 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 CCR4P51679 360 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 CRYBB1P53674 252 aaPredicted RBP9.27□□□□□ -0.93
RPSA-209ENST00000495394 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
RPSA-209ENST00000495394 MC1RQ01726 317 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 SMCO1Q147U7 214 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 SNX17Q15036 470 aa9.27□□□□□ -0.93
RPSA-209ENST00000495394 TRIP13Q15645 432 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms