RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 DCDC1P59894 354 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 EIF3EP60228 445 aaKnown RBP10.49□□□□□ -0.73
NELFE-213ENST00000494956 NFATC2Q13469 925 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 SPARCL1Q14515 664 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 NR1D2Q14995 579 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 SLC1A5Q15758 541 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 SEPT7Q16181 437 aaKnown RBP10.49□□□□□ -0.73
NELFE-213ENST00000494956 ATP13A5Q4VNC0 1218 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 CCDC70Q6NSX1 233 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 IGF2-ASQ6U949 168 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 CLEC14AQ86T13 490 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 PIM3Q86V86 326 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 ZNF547Q8IVP9 402 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 SFRP1Q8N474 314 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 CCDC110Q8TBZ0 833 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 GLYATL1Q969I3 302 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 GRAMD1AQ96CP6 724 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 RNF31Q96EP0 1072 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 CCDC74BQ96LY2 380 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 STRADBQ9C0K7 418 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 OSGEPL1Q9H4B0 414 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A7Q9HAW7 530 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A10Q9HAW8 530 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A8Q9HAW9 530 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 TRIM39Q9HCM9 518 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 KLC4Q9NSK0 619 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 FOXJ2Q9P0K8 574 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 KCTD3Q9Y597 815 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 ZNF106Q9H2Y7 1883 aaKnown RBP10.49□□□□□ -0.73
NELFE-213ENST00000494956 SDK2Q58EX2 2172 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 TCRBV7S2A1N4TA0A589 114 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CCDC66A2RUB6 948 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 RGSL1A5PLK6 1076 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 A6NCN8 305 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 A8MU76 341 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 BTNL10A8MVZ5 291 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 GAPDHSO14556 408 aaPredicted RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 DDX3YO15523 660 aaKnown RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 KCNN4O15554 427 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 IPO7O95373 1038 aaKnown RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 CPNE6O95741 557 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 JMJD7P0C870 316 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 RBP3P10745 1247 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 MAPK9P45984 424 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 RWDD2BP57060 319 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 COPS2P61201 443 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CLN3Q13286 438 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 XRCC4Q13426 336 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 LRP8Q14114 963 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CHRNA6Q15825 494 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 ANKRD20A2Q5SQ80 823 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 SNAP47Q5SQN1 464 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 ANKRD20A1Q5TYW2 823 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 ANKRD20A3Q5VUR7 823 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 IYDQ6PHW0 289 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 DARS2Q6PI48 645 aaKnown RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 FAM151BQ6UXP7 276 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 ZFAND4Q86XD8 727 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 RAVER1Q8IY67 606 aaKnown RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 TAB3Q8N5C8 712 aaPredicted RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 USP7Q93009 1102 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 ZSCAN5AQ9BUG6 496 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 TBC1D10AQ9BXI6 508 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 GBA3Q9H227 469 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CARD9Q9H257 536 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 IL26Q9NPH9 171 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 IL17CQ9P0M4 197 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 AMFRQ9UKV5 643 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 R3HDM2Q9Y2K5 976 aaKnown RBP10.48□□□□□ -0.73
NELFE-213ENST00000494956 ARL5AQ9Y689 179 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 CAPN6Q9Y6Q1 641 aa10.48□□□□□ -0.73
NELFE-213ENST00000494956 C9orf172C9J069 976 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 CHUKO15111 745 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 EFSO43281 561 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 MTSS1O43312 755 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 ZNF7P17097 686 aaPredicted RBP10.47□□□□□ -0.73
NELFE-213ENST00000494956 RPL10P27635 214 aaKnown RBP10.47□□□□□ -0.73
NELFE-213ENST00000494956 HMGCLP35914 325 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 FASLGP48023 281 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 ARSDP51689 593 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 CTSCP53634 463 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 DRG2P55039 364 aaKnown RBP10.47□□□□□ -0.73
NELFE-213ENST00000494956 HHEXQ03014 270 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 MPP3Q13368 585 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 COL9A2Q14055 689 aaPredicted RBP10.47□□□□□ -0.73
NELFE-213ENST00000494956 INSCQ1MX18 579 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 KIAA1614Q5VZ46 1190 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 PCSK4Q6UW60 755 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 GPR155Q7Z3F1 870 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 PEX26Q7Z412 305 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 GLT6D1Q7Z4J2 308 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 PHYKPLQ8IUZ5 450 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 GDAP1Q8TB36 358 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 JPH3Q8WXH2 748 aaPredicted RBP10.47□□□□□ -0.73
NELFE-213ENST00000494956 PLEKHG4BQ96PX9 1271 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 VAT1Q99536 393 aa10.47□□□□□ -0.73
NELFE-213ENST00000494956 SLC38A3Q99624 504 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms