RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DNAJB1P25685 340 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 OR3A3P47888 321 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 NDST1P52848 882 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 TUBA1BP68363 451 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 GRM1Q13255 1194 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 RAPSNQ13702 412 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 NFYCQ13952 458 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 IRF3Q14653 427 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SMN1Q16637 294 aaKnown RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 GOLGA7BQ2TAP0 167 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF404Q494X3 552 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SYT6Q5T7P8 510 aaPredicted RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF691Q5VV52 312 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 GLYATQ6IB77 296 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SULT1C3Q6IMI6 304 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 BLOC1S3Q6QNY0 202 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ABHD15Q6UXT9 468 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 NEK10Q6ZWH5 1172 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 TUBA1AQ71U36 451 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 B3GNT8Q7Z7M8 397 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 FAM131BQ86XD5 332 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 PLD3Q8IV08 490 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 DCP1BQ8IZD4 617 aaKnown RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 DTWD1Q8N5C7 304 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 PJA1Q8NG27 643 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SH3RF2Q8TEC5 729 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ZHX1-C8orf76Q96EF9 292 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 REXO4Q9GZR2 422 aaKnown RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 TUBB1Q9H4B7 451 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 RNF167Q9H6Y7 350 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 C14orf119Q9NWQ9 140 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 KLHL8Q9P2G9 620 aaPredicted RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SATB2Q9UPW6 733 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 PCNTO95613 3336 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 A0A1B0GTL3 188 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 LOC100130705A0A1B0GUX0 176 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 G3V2T6 193 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 UBXN8O00124 270 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 PIP5K1BO14986 540 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 MTSS1O43312 755 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SCO1O75880 301 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 BBOX1O75936 387 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 TPPPO94811 219 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SLC4A1P02730 911 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 MYL3P08590 195 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 CXCL8P10145 99 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 VDRP11473 427 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ENPP1P22413 925 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 CASP2P42575 452 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SH3BP2P78314 561 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 PITX1P78337 314 aaPredicted RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ARHGEF6Q15052 776 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 BCL7AQ4VC05 210 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SOWAHCQ53LP3 525 aaPredicted RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF789Q5FWF6 425 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 TJAP1Q5JTD0 557 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF470Q6ECI4 717 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ENPP6Q6UWR7 440 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 VN1R5Q7Z5H4 357 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 CCDC28AQ8IWP9 274 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 MIER2Q8N344 545 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 NUDT8Q8WV74 236 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ASB2Q96Q27 587 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 FYTTD1Q96QD9 318 aaKnown RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 ZC3H12CQ9C0D7 883 aaKnown RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 SLC2A6Q9UGQ3 507 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 STAP1Q9ULZ2 295 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 MN1Q10571 1320 aaPredicted RBP10.06□□□□□ -0.8
LINC00488-201ENST00000494582 CITO14578 2027 aa10.06□□□□□ -0.8
LINC00488-201ENST00000494582 NRXN2Q9P2S2 1712 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SAGE2PA6NJ88 616 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 SYCE1LA8MT33 242 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 EFCAB9A8MZ26 197 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 H3BQ06 376 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 POLR1CO15160 346 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 MITFO75030 526 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ITGB3P05106 788 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CYP2B6P20813 491 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 IMPDH1P20839 514 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 HADHAP40939 763 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 MFSD10Q14728 455 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 TRIP4Q15650 581 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 PRSS36Q5K4E3 855 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 TPRG1LQ5T0D9 272 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 PPP1R26Q5T8A7 1209 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF544Q6NX49 715 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 PNCKQ6P2M8 343 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 LCLAT1Q6UWP7 414 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 FAM160B2Q86V87 743 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 C7orf31Q8N865 590 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 BEST2Q8NFU1 509 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 ANKRD49Q8WVL7 239 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CENPIQ92674 756 aaPredicted RBP10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CDCA5Q96FF9 252 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 CDADC1Q9BWV3 514 aa10.05□□□□□ -0.8
LINC00488-201ENST00000494582 BEX2Q9BXY8 128 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms