RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NR2F6P10588 404 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 PRMT2P55345 433 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 RALGDSQ12967 914 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 LIN54Q6MZP7 749 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 PSMA8Q8TAA3 256 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 CIB1Q99828 191 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 GORASP1Q9BQQ3 440 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 UNC93B1Q9H1C4 597 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 GMIPQ9P107 970 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 ZNF214Q9UL59 606 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 COLEC10Q9Y6Z7 277 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 NELFEP18615 380 aaKnown RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 TMEM63BQ5T3F8 832 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 FAAH2Q6GMR7 532 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 NIPA2Q8N8Q9 360 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 C2orf15Q8WU43 125 aaKnown RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 FEM1CQ96JP0 617 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 LENG8Q96PV6 779 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 AARSD1Q9BTE6 412 aaKnown RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 SGK2Q9HBY8 427 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 ZNF490Q9ULM2 529 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 PADI3Q9ULW8 664 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 CBFA2T3O75081 653 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 S100GP29377 79 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 CDH4P55283 916 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 MPP1Q00013 466 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 CFAP52Q8N1V2 620 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 UPF1Q92900 1129 aaKnown RBP eCLIP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 CADM1Q9BY67 442 aaKnown RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 ZBTB2Q8N680 514 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 AP2M1Q96CW1 435 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 MAGEH1Q9H213 219 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 LRTM1Q9HBL6 345 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 NECTIN3Q9NQS3 549 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 PPIEQ9UNP9 301 aaKnown RBP19.03■□□□□ 0.64
COL27A1-207ENST00000494090 RAI2Q9Y5P3 530 aa19.03■□□□□ 0.64
COL27A1-207ENST00000494090 IDH3AP50213 366 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 SLC5A3P53794 718 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 REP15Q6BDI9 236 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 FAM171BQ6P995 826 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 BORCS5Q969J3 196 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 SNX27Q96L92 541 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 WDR12Q9GZL7 423 aaKnown RBP19.02■□□□□ 0.64
COL27A1-207ENST00000494090 ABCG4Q9H172 646 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 FZD10Q9ULW2 581 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 NT5C1B-RDH14C9J2C7 533 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 AP1S1P61966 158 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 MOB2Q70IA6 237 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 NUDT4Q9NZJ9 180 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 MAT2BQ9NZL9 334 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 LYNP07948 512 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 SAPCD2Q86UD0 394 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 SLCO2A1Q92959 643 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 CRISPLD1Q9H336 500 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 TOR4AQ9NXH8 423 aa19.02■□□□□ 0.64
COL27A1-207ENST00000494090 A0A1B0GVM2 712 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 TCAF2A6NFQ2 919 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 LDOC1O95751 146 aaPredicted RBP19.02■□□□□ 0.63
COL27A1-207ENST00000494090 KLHL24Q6TFL4 600 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 TMC8Q8IU68 726 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 PYROXD2Q8N2H3 581 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 ADAMTS15Q8TE58 950 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 SLC22A17Q8WUG5 538 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 GAS2L1Q99501 681 aaPredicted RBP19.02■□□□□ 0.63
COL27A1-207ENST00000494090 XPNPEP1Q9NQW7 623 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 MTRRQ9UBK8 725 aa19.02■□□□□ 0.63
COL27A1-207ENST00000494090 H3BNX3 289 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 CDK14O94921 469 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 TRBC1P01850 177 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 TGFBR2P37173 567 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 GDF10P55107 478 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 TAS2R41P59536 307 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.01■□□□□ 0.63
COL27A1-207ENST00000494090 COMMD9Q9P000 198 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 SQORQ9Y6N5 450 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 NPHS1O60500 1241 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 DNAJA2O60884 412 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 SCN2BO60939 215 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 LCP2Q13094 533 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 ZNF781Q8N8C0 355 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 OGDHLQ9ULD0 1010 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 VIPP01282 170 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 MTHFRP42898 656 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 ASPAP45381 313 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 VPS26BQ4G0F5 336 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 CHST9Q7L1S5 443 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 PCDH19Q8TAB3 1148 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 SLC9A7Q96T83 725 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 GATA5Q9BWX5 397 aaPredicted RBP19.01■□□□□ 0.63
COL27A1-207ENST00000494090 DPEP3Q9H4B8 488 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 IGSF9Q9P2J2 1179 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 AJAP1Q9UKB5 411 aaPredicted RBP19.01■□□□□ 0.63
COL27A1-207ENST00000494090 FAM86C2PA6NEL3 165 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 CCDC182A6NF36 153 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 IGFALSP35858 605 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 CLCQ05315 142 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 BLMHQ13867 455 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 KHDC1Q4VXA5 237 aaKnown RBP19.01■□□□□ 0.63
COL27A1-207ENST00000494090 NPAS4Q8IUM7 802 aa19.01■□□□□ 0.63
COL27A1-207ENST00000494090 PIK3C3Q8NEB9 887 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms