RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 UBFD1O14562 309 aaKnown RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 EFCAB14O75071 495 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TSPAN8P19075 237 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 HOXD12P35452 270 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 PTPRNQ16849 979 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 GPR65Q8IYL9 337 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 DDI1Q8WTU0 396 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TRIM43Q96BQ3 446 aaPredicted RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 SEMA6AQ9H2E6 1030 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 MEAF6Q9HAF1 191 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 ZBTB26Q9HCK0 441 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 HACD3Q9P035 362 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 VPS9D1Q9Y2B5 631 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 FNDC3AQ9Y2H6 1198 aaKnown RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 K7ERQ8 282 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 UBXN8O00124 270 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 FZD6O60353 706 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 FGF18O76093 207 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 CKMP06732 381 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 MTHFD2P13995 350 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 NELFEP18615 380 aaKnown RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 C1QTNF8P60827 252 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 CREMQ03060 361 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 UGT2A3Q6UWM9 527 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 LAYNQ6UX15 382 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 C16orf89Q6UX73 402 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 APCDD1Q8J025 514 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 ZBTB8BQ8NAP8 495 aaPredicted RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 KLHL32Q96NJ5 620 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 ATOH8Q96SQ7 321 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TM6SF2Q9BZW4 377 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TRAF6Q9Y4K3 522 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 CTSAP10619 480 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TTPAP49638 278 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 RALGDSQ12967 914 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 HERC3Q15034 1050 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 ZNF423Q2M1K9 1284 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 ZRANB3Q5FWF4 1079 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 OGFRL1Q5TC84 451 aaPredicted RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
VCP-207ENST00000493886 BIRC8Q96P09 236 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 SERPINI1Q99574 410 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 GPR21Q99679 349 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 PKP2Q99959 881 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 GRIP2Q9C0E4 1043 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 DERL2Q9GZP9 239 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 PCDHAC1Q9H158 963 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 CFAP97Q9P2B7 532 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 TIMM22Q9Y584 194 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 AP4B1Q9Y6B7 739 aa13.67□□□□□ -0.22
VCP-207ENST00000493886 KIAA1671Q9BY89 1806 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 GBF1Q92538 1859 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 A0A1B0GTW7 788 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PFDN6O15212 129 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 LRG1P02750 347 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 NFKBIAP25963 317 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 RAD51Q06609 339 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 NRF1Q16656 503 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 TMC8Q8IU68 726 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PELI3Q8N2H9 469 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 KIAA1191Q96A73 305 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 OAS3Q9Y6K5 1087 aaKnown RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 H7C0S8 307 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 OR1I1O60431 355 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 DNAJA2O60884 412 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 SIX3O95343 332 aaPredicted RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 CDH13P55290 713 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 AP1S1P61966 158 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 SLC7A9P82251 487 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 PPP1R3AQ16821 1122 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 RARS2Q5T160 578 aaKnown RBP13.66□□□□□ -0.22
VCP-207ENST00000493886 ARMC12Q5T9G4 340 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 CLEC6AQ6EIG7 209 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 RETSATQ6NUM9 610 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 HTR3DQ70Z44 454 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 OTOP2Q7RTS6 562 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 BBS7Q8IWZ6 715 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 MYO1HQ8N1T3 1032 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 STAG3L4Q8TBR4 150 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 NAT14Q8WUY8 206 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 LRRC3Q9BY71 257 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 ZNF711Q9Y462 761 aa13.66□□□□□ -0.22
VCP-207ENST00000493886 DENND4CQ5VZ89 1909 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 CASQ2O14958 399 aaPredicted RBP13.65□□□□□ -0.22
VCP-207ENST00000493886 SMAD6O43541 496 aaKnown RBP13.65□□□□□ -0.22
VCP-207ENST00000493886 SH3BP5O60239 455 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 KERAO60938 352 aa13.65□□□□□ -0.22
VCP-207ENST00000493886 PRAMEF12O95522 483 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms