RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ACKR2O00590 384 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 AP3D1O14617 1153 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 HS6ST1O60243 411 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 CNTN5O94779 1100 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PARNO95453 639 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ALOX12P18054 663 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 DNAJB1P25685 340 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ATICP31939 592 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 NPTX1Q15818 432 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 VARS2Q5ST30 1063 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ZNF678Q5SXM1 525 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ZCCHC8Q6NZY4 707 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PHYKPLQ8IUZ5 450 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 NLGN4XQ8N0W4 816 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 DTWD1Q8N5C7 304 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 IL17RDQ8NFM7 739 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ITFG1Q8TB96 612 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 TRAPPC12Q8WVT3 735 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ZHX1-C8orf76Q96EF9 292 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 NSUN5Q96P11 429 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ATXN3LQ9H3M9 355 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 CARS2Q9HA77 564 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 FBXO5Q9UKT4 447 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 EIF3LQ9Y262 564 aaKnown RBP11.62□□□□□ -0.55
HDAC4-210ENST00000493582 ANGPTL3Q9Y5C1 460 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 NRCAMQ92823 1304 aa11.62□□□□□ -0.55
HDAC4-210ENST00000493582 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 A0A1B0GTL3 188 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 PRMT5O14744 637 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 DCLK1O15075 740 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 DNAJB5O75953 348 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CDK14O94921 469 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FADS2O95864 444 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GOT2P00505 430 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 LTA4HP09960 611 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ACVR2AP27037 513 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 KCNK10P57789 538 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 IL5RAQ01344 420 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GALK2Q01415 458 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CDK5R2Q13319 367 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CLCA4Q14CN2 919 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 TRIP4Q15650 581 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 SLC10A6Q3KNW5 377 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FBXO48Q5FWF7 155 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 HABP4Q5JVS0 413 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 LYPD8Q6UX82 237 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 BPHLQ86WA6 291 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 RYBPQ8N488 228 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 SH3RF2Q8TEC5 729 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 MED30Q96HR3 178 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ZFYVE19Q96K21 471 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 DEPDC7Q96QD5 511 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 REXO4Q9GZR2 422 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 IRF2BPLQ9H1B7 796 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 RPAP3Q9H6T3 665 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ZBTB20Q9HC78 741 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 NAALAD2Q9Y3Q0 740 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ERI2A8K979 691 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GNGT2O14610 69 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 PRSS23O95084 383 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 C1RP00736 705 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FTH1P02794 183 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GRK3P35626 688 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ACADSBP45954 432 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 KRT6CP48668 564 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GNG2P59768 71 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 UFM1P61960 85 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ZNF181Q2M3W8 571 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 FAM214AQ32MH5 1076 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 AGAP6Q5VW22 663 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 BEST2Q8NFU1 509 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 IPMKQ8NFU5 416 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 NUDT8Q8WV74 236 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 AGAP4Q96P64 663 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 SH3GL1Q99961 368 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 RCOR3Q9P2K3 495 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 OPTCQ9UBM4 332 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 POLG2Q9UHN1 485 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 U3KQV3 271 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 LY75O60449 1722 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 SIP14410 1827 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 PABPN1LA6NDY0 278 aaKnown RBP11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GOLGA8CPA6NN73 597 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 H0Y626 953 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 M0QYT0 321 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 TRIM16O95361 564 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 ANGPTL1O95841 491 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CST1P01037 141 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 RAP2AP10114 183 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 LBPP18428 481 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 MASP1P48740 699 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 SLC26A2P50443 739 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 P2RX3P56373 397 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 MTPNP58546 118 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 POU4F1Q01851 419 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 CHRNB3Q05901 458 aa11.61□□□□□ -0.55
HDAC4-210ENST00000493582 GALNT1Q10472 559 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms