RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 NIPAL4Q0D2K0 466 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 KRT81Q14533 505 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 ANKRD20A8PQ5CZ79 823 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 TIGD7Q6NT04 549 aaPredicted RBP21.16■□□□□ 0.98
PFDN4-205ENST00000493356 RASGRP3Q8IV61 690 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 ELMO2Q96JJ3 720 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 ISCUQ9H1K1 167 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 ZNF768Q9H5H4 540 aaKnown RBP21.16■□□□□ 0.98
PFDN4-205ENST00000493356 ARFGAP3Q9NP61 516 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 LMBRD1Q9NUN5 540 aa21.16■□□□□ 0.98
PFDN4-205ENST00000493356 PRRC2CQ9Y520 2896 aaKnown RBP21.15■□□□□ 0.98
PFDN4-205ENST00000493356 CDC14CA4D256 554 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 RGSL1A5PLK6 1076 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 GOLGA6L3A6NEY3 463 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 CD48P09326 243 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 SLC19A1P41440 591 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 UQCRFS1P47985 274 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 QPCTQ16769 361 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 ZNF648Q5T619 568 aaPredicted RBP21.15■□□□□ 0.98
PFDN4-205ENST00000493356 HIST2H2BCQ6DN03 193 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 SASS6Q6UVJ0 657 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 NIPA2Q8N8Q9 360 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 FAM71BQ8TC56 605 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 CCHCR1Q8TD31 782 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 FATE1Q969F0 183 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 OR2AG1Q9H205 316 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 ZNF624Q9P2J8 865 aaPredicted RBP21.15■□□□□ 0.98
PFDN4-205ENST00000493356 LNPEPQ9UIQ6 1025 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 PCDHGA6Q9Y5G7 932 aa21.15■□□□□ 0.98
PFDN4-205ENST00000493356 TNRC6AQ8NDV7 1962 aaKnown RBP21.14■□□□□ 0.98
PFDN4-205ENST00000493356 CREG1O75629 220 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 RASSF9O75901 435 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 VIPP01282 170 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 PDGFAP04085 211 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 HLA-DQB2P05538 268 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 FGF5P12034 268 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 AMD1P17707 334 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 KLHL30Q0D2K2 578 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 PAFAH1B3Q15102 231 aaKnown RBP21.14■□□□□ 0.97
PFDN4-205ENST00000493356 STX1AQ16623 288 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 CCDC122Q5T0U0 273 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 NCBP2-AS2Q69YL0 99 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 TRIM48Q8IWZ4 208 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 BTBD6Q96KE9 485 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 TSGA13Q96PP4 275 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 TWSG1Q9GZX9 223 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 HAUS2Q9NVX0 235 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 SLC23A2Q9UGH3 650 aa21.14■□□□□ 0.97
PFDN4-205ENST00000493356 PIPSLA2A3N6 862 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 ANKRD66B4E2M5 251 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 KIF1CO43896 1103 aaKnown RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 SPAG6O75602 509 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 MTA2O94776 668 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 RECKO95980 971 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 CCNYL3P0C7X3 344 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 CCNCP24863 283 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 DNASE1L3Q13609 305 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 IFI16Q16666 785 aaKnown RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 CAPRIN2Q6IMN6 1127 aaKnown RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 CRTC3Q6UUV7 619 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 PRSS42Q7Z5A4 293 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 APLFQ8IW19 511 aaPredicted RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 RSC1A1Q92681 617 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 EID2BQ96D98 161 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 MLPHQ9BV36 600 aaPredicted RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 TRIM39Q9HCM9 518 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 RTN4Q9NQC3 1192 aaKnown RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 DTLQ9NZJ0 730 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 PLEKHB1Q9UF11 243 aaPredicted RBP21.13■□□□□ 0.97
PFDN4-205ENST00000493356 PADI1Q9ULC6 663 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 CENPEQ02224 2701 aa21.13■□□□□ 0.97
PFDN4-205ENST00000493356 GPR89AB7ZAQ6 455 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 CHUKO15111 745 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 VPS4BO75351 444 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 DNAJB5O75953 348 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 SLC25A14O95258 325 aaPredicted RBP21.12■□□□□ 0.97
PFDN4-205ENST00000493356 GPR89BP0CG08 455 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 SKILP12757 684 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 CAPZBP47756 277 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 ARSEP51690 589 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 INSCQ1MX18 579 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 PLA2G4EQ3MJ16 856 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.12■□□□□ 0.97
PFDN4-205ENST00000493356 TDRD12Q587J7 1177 aaKnown RBP21.12■□□□□ 0.97
PFDN4-205ENST00000493356 ZNF569Q5MCW4 686 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 ADGRG6Q86SQ4 1221 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 CT55Q8WUE5 264 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 LRRN4Q8WUT4 740 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 KLHL6Q8WZ60 621 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 SPATA16Q9BXB7 569 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 IP6K2Q9UHH9 426 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 ANAPC7Q9UJX3 599 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 VPS4AQ9UN37 437 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 GTF3C3Q9Y5Q9 886 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 ITPR2Q14571 2701 aa21.12■□□□□ 0.97
PFDN4-205ENST00000493356 TTLL8A6PVC2 850 aa21.11■□□□□ 0.97
PFDN4-205ENST00000493356 PDZK1P1A8MUH7 402 aa21.11■□□□□ 0.97
PFDN4-205ENST00000493356 AGFG2O95081 481 aa21.11■□□□□ 0.97
PFDN4-205ENST00000493356 MT-ND3P03897 115 aa21.11■□□□□ 0.97
PFDN4-205ENST00000493356 MMP2P08253 660 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms