RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CHUKO15111 745 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 TOX3O15405 576 aaPredicted RBP12.3□□□□□ -0.44
COL6A1-205ENST00000492851 PPFIA2O75334 1257 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 CDK14O94921 469 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 ZRANB2O95218 330 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL6A1-205ENST00000492851 VIPP01282 170 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 COMTP21964 271 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 MPSTP25325 297 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 CSF2RBP32927 897 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 UGT1A3P35503 534 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 HMGCLP35914 325 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 MAGEA1P43355 309 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 DYNLT1P63172 113 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 MC2RQ01718 297 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 NFATC2Q13469 925 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 GTF2H3Q13889 308 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 PCSK7Q16549 785 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 TAZQ16635 292 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 MFSD7Q6UXD7 560 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 ARHGAP22Q7Z5H3 698 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 LRRTM4Q86VH4 590 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 RCOR2Q8IZ40 523 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 GPR26Q8NDV2 337 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 EID2BQ96D98 161 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 TTC25Q96NG3 672 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 CATSPER2Q96P56 530 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 VPS35Q96QK1 796 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 TIMM29Q9BSF4 260 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 KLC4Q9NSK0 619 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 HEMK1Q9Y5R4 338 aaPredicted RBP12.3□□□□□ -0.44
COL6A1-205ENST00000492851 B3GALT1Q9Y5Z6 326 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 ADGRG1Q9Y653 693 aa12.3□□□□□ -0.44
COL6A1-205ENST00000492851 LOC285095A0A1B0GVY8 99 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 LILRA5A6NI73 299 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 HACD1B0YJ81 288 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 CST8O60676 142 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 PMPCBO75439 489 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 EML2O95834 649 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 TNNT1P13805 278 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 IDSP22304 550 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 PTPN3P26045 913 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 CDKN2BP42772 138 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 PRKD1Q15139 912 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-205ENST00000492851 INSCQ1MX18 579 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 LINC00303Q3SY05 128 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 TFDP3Q5H9I0 405 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 AGAP9Q5VTM2 703 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 ALS2CLQ60I27 953 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 CYB5D1Q6P9G0 228 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 ABRAXAS1Q6UWZ7 409 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 NPNTQ6UXI9 565 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 ADGRG6Q86SQ4 1221 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 VASH2Q86V25 355 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 CCDC170Q8IYT3 715 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 CACNA2D3Q8IZS8 1091 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 BMPERQ8N8U9 685 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 KIAA1143Q96AT1 154 aaPredicted RBP12.29□□□□□ -0.44
COL6A1-205ENST00000492851 CEP41Q9BYV8 373 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 ZCCHC2Q9C0B9 1178 aaKnown RBP12.29□□□□□ -0.44
COL6A1-205ENST00000492851 SEMA4CQ9C0C4 833 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 ADNPQ9H2P0 1102 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 OSGEPL1Q9H4B0 414 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 WASH6PQ9NQA3 447 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 PRDM8Q9NQV8 689 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 OCIAD1Q9NX40 245 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 TRHDEQ9UKU6 1024 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
COL6A1-205ENST00000492851 MGAQ8IWI9 3026 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 A8MU76 341 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 POLR1CO15160 346 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 RAD1O60671 282 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 ZNF189O75820 626 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 ANKRD34CP0C6C1 535 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 PIRTP0C851 137 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 ZNF7P17097 686 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 BPIP17213 487 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 AMD1P17707 334 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 HALP42357 657 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 UBE2IP63279 158 aaKnown RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 MC1RQ01726 317 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 XRCC4Q13426 336 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 SPA17Q15506 151 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 TBR1Q16650 682 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 SNAP47Q5SQN1 464 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 ANKS6Q68DC2 871 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 BORAQ6PGQ7 559 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 TMEM26Q6ZUK4 368 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 PID1Q7Z2X4 250 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 ZNF761Q86XN6 746 aaPredicted RBP12.28□□□□□ -0.44
COL6A1-205ENST00000492851 KATNAL2Q8IYT4 538 aa12.28□□□□□ -0.44
COL6A1-205ENST00000492851 NLGN4XQ8N0W4 816 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms