RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TGIF1Q15583 401 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 INSCQ1MX18 579 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 WASH2PQ6VEQ5 465 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TMPRSS9Q7Z410 1059 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TRIM74Q86UV6 250 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 LRRTM4Q86VH4 590 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 ZFAND4Q86XD8 727 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 FAM129CQ86XR2 697 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 SFTPA2Q8IWL1 248 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TRIM48Q8IWZ4 208 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 CNTD1Q8N815 330 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 RCBTB1Q8NDN9 531 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 PATE1Q8WXA2 126 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TADA1Q96BN2 335 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 LRRC45Q96CN5 670 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 RBM41Q96IZ5 413 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 TEKT5Q96M29 485 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 AGAP3Q96P47 875 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 PPP1R2P1Q96PQ5 205 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TRIB3Q96RU7 358 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 AGAP2Q99490 1192 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 TSPY26PQ9H489 355 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 GLOD4Q9HC38 313 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 WASH6PQ9NQA3 447 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 FBXO8Q9NRD0 319 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 FOXJ2Q9P0K8 574 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 CPNE7Q9UBL6 633 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 IL17BQ9UHF5 180 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 FAM153AQ9UHL3 310 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 CNOT6Q9ULM6 557 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 ZNF711Q9Y462 761 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 ST14Q9Y5Y6 855 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
NUP50-217ENST00000491860 BOD1L1Q8NFC6 3051 aa8.65□□□□□ -1.02
NUP50-217ENST00000491860 PIEZO2Q9H5I5 2752 aa8.65□□□□□ -1.03
NUP50-217ENST00000491860 BSNQ9UPA5 3926 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 MN1Q10571 1320 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 A6NCN8 305 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 EFCAB7A8K855 629 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 FADS2P1A8MWK0 482 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 HACD1B0YJ81 288 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 AKR1B15C9JRZ8 316 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 SNX2O60749 519 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 CDK14O94921 469 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 CCL4P13236 92 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 HLA-DPA1P20036 260 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 CSF2RBP32927 897 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 UGT1A3P35503 534 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 HALP42357 657 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ABHD18Q0P651 414 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ZBTB17Q13105 803 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 MPP3Q13368 585 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 NFATC2Q13469 925 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ITGA9Q13797 1035 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 MAP7Q14244 749 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 GALNT3Q14435 633 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 PRKD1Q15139 912 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 PTPRRQ15256 657 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 CRTC2Q53ET0 693 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 TFDP3Q5H9I0 405 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 AGAP9Q5VTM2 703 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 NKAIN2Q5VXU1 208 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 BORAQ6PGQ7 559 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 RFLNAQ6ZTI6 216 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ARHGAP22Q7Z5H3 698 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 CCDC170Q8IYT3 715 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 CACNA2D3Q8IZS8 1091 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 NLGN4XQ8N0W4 816 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 NLGN4YQ8NFZ3 816 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 NCSTNQ92542 709 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 P3H4Q92791 437 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ART4Q93070 314 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 NKD1Q969G9 470 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 TTC25Q96NG3 672 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 WDR24Q96S15 920 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 OR2AG1Q9H205 316 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 KLC4Q9NSK0 619 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 POT1Q9NUX5 634 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ATXN10Q9UBB4 475 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 TBC1D29Q9UFV1 150 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 TUBD1Q9UJT1 453 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 KCNK6Q9Y257 313 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 PLEKHM1Q9Y4G2 1056 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 ADGRG1Q9Y653 693 aa8.64□□□□□ -1.03
NUP50-217ENST00000491860 DNMT3AQ9Y6K1 912 aaPredicted RBP8.64□□□□□ -1.03
NUP50-217ENST00000491860 PDZK1P1A8MUH7 402 aa8.63□□□□□ -1.03
NUP50-217ENST00000491860 PYCARD-AS1I3L0S3 204 aa8.63□□□□□ -1.03
NUP50-217ENST00000491860 POLR1CO15160 346 aaPredicted RBP8.63□□□□□ -1.03
NUP50-217ENST00000491860 RAD1O60671 282 aa8.63□□□□□ -1.03
NUP50-217ENST00000491860 CST8O60676 142 aa8.63□□□□□ -1.03
NUP50-217ENST00000491860 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
NUP50-217ENST00000491860 PYGMP11217 842 aa8.63□□□□□ -1.03
NUP50-217ENST00000491860 ZNF7P17097 686 aaPredicted RBP8.63□□□□□ -1.03
NUP50-217ENST00000491860 ZNF8P17098 575 aaPredicted RBP8.63□□□□□ -1.03
NUP50-217ENST00000491860 COMTP21964 271 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms