RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RRM1P23921 792 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KDELR1P24390 212 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 FPR3P25089 353 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CNTFP26441 200 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HOXA13P31271 388 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CDH5P33151 784 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CBSP35520 551 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 COPB2P35606 906 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PGM1P36871 562 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 VIPR2P41587 438 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PTDSS1P48651 473 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NR2C2P49116 596 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SERPINB9P50453 376 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MXI1P50539 228 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 RENBPP51606 427 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ARSEP51690 589 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DGKEP52429 567 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 EFNA5P52803 228 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 RAD23BP54727 409 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SUMO3P55854 103 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ARL4CP56559 192 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 YWHAEP62258 255 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 AP2B1P63010 937 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NOP14P78316 857 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NKX6-1P78426 367 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ROR2Q01974 943 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ZBTB16Q05516 673 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 POU5F1BQ06416 359 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CYP24A1Q07973 514 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 AP1B1Q10567 949 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TCP10Q12799 353 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PDIA2Q13087 525 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 GPS1Q13098 491 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 STX3Q13277 289 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DMP1Q13316 513 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MED21Q13503 144 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ITGA9Q13797 1035 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HNRNPDQ14103 355 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TFDP2Q14188 446 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 COG2Q14746 738 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PSMD6Q15008 389 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PDK2Q15119 407 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC1A5Q15758 541 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CCDC6Q16204 474 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PKN2Q16513 984 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TAZQ16635 292 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MAPK6Q16659 721 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 INSCQ1MX18 579 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 P3H1Q32P28 736 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PTCHD3Q3KNS1 767 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ZACNQ401N2 412 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 USH1GQ495M9 461 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TAF1BQ53T94 588 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 HSP90AA5PQ58FG0 334 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 XKR3Q5GH77 459 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM63BQ5T3F8 832 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM102BQ5T8I3 360 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SNX30Q5VWJ9 437 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 IZUMO3Q5VZ72 239 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 FAM91A1Q658Y4 838 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PLA2G4FQ68DD2 849 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 OR52E8Q6IFG1 317 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 C11orf87Q6NUJ2 197 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SWSAP1Q6NVH7 229 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 IRGCQ6NXR0 463 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM154Q6P9G4 183 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DCUN1D2Q6PH85 259 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 LVRNQ6Q4G3 990 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KIRREL2Q6UWL6 708 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SH2D5Q6ZV89 423 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MAEAQ7L5Y9 396 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NLRP9Q7RTR0 991 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 OTOAQ7RTW8 1153 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TMPRSS9Q7Z410 1059 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NET1Q7Z628 596 aaPredicted RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PHLDB2Q86SQ0 1253 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAAF5Q86Y56 855 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 PALB2Q86YC2 1186 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CRLF3Q8IUI8 442 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM126BQ8IUX1 230 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DENND1CQ8IV53 801 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NUDCD3Q8IVD9 361 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 P3H2Q8IVL5 708 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 WDR75Q8IWA0 830 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DAW1Q8N136 415 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 GALNT15Q8N3T1 639 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 GALNT16Q8N428 558 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 TTC39CQ8N584 583 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CERS5Q8N5B7 392 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ALLCQ8N6M5 410 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 CELF5Q8N6W0 485 aaKnown RBP2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 NIPA2Q8N8Q9 360 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 ANKRD42Q8N9B4 389 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 BANPQ8N9N5 519 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 SLC4A11Q8NBS3 891 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 KCTD6Q8NC69 237 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 MCUQ8NE86 351 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 OLIG1Q8TAK6 271 aa2.08□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAJB14Q8TBM8 379 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms