RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 GRTP1Q5TC63 336 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 STRA8Q7Z7C7 330 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 LDB1Q86U70 411 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-230ENST00000491028 IQCHQ86VS3 1027 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 RGL4Q8IZJ4 473 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 IQCKQ8N0W5 287 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 LPGAT1Q92604 370 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 FUBP1Q96AE4 644 aaKnown RBP18.44■□□□□ 0.54
MCF2L-230ENST00000491028 DCUN1D1Q96GG9 259 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 SLC6A18Q96N87 628 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 DHRS4Q9BTZ2 278 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 TRIM39Q9HCM9 518 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 FBXO6Q9NRD1 293 aaPredicted RBP18.44■□□□□ 0.54
MCF2L-230ENST00000491028 AASDHPPTQ9NRN7 309 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 ZNF180Q9UJW8 692 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 OR1A2Q9Y585 309 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 PSAT1Q9Y617 370 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 IKBKGQ9Y6K9 419 aa18.44■□□□□ 0.54
MCF2L-230ENST00000491028 GPR89AB7ZAQ6 455 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 POC1B-GALNT4F8VUJ3 575 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 H0Y8X5 98 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 PRMT5O14744 637 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 PIAS1O75925 651 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 INHBAP08476 426 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 GPR89BP0CG08 455 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 RPS3P23396 243 aaKnown RBP eCLIP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 DPP6P42658 865 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 MSH2P43246 934 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 DHPSP49366 369 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 OVGP1Q12889 678 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 NFATC4Q14934 902 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 ZC3H14Q6PJT7 736 aaKnown RBP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 LRIG3Q6UXM1 1119 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 ARMCX6Q7L4S7 300 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 TAOK1Q7L7X3 1001 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 HDXQ7Z353 690 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 DCP2Q8IU60 420 aaKnown RBP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 MFSD2AQ8NA29 543 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 RBBP8Q99708 897 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 MCMBPQ9BTE3 642 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 ROPN1BQ9BZX4 212 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 RHOJQ9H4E5 214 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 ROPN1Q9HAT0 212 aaPredicted RBP18.43■□□□□ 0.54
MCF2L-230ENST00000491028 TM9SF3Q9HD45 589 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 GPR27Q9NS67 375 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 RAPGEFL1Q9UHV5 662 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 CA5BQ9Y2D0 317 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 PCDHB1Q9Y5F3 818 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 ABCA7Q8IZY2 2146 aa18.43■□□□□ 0.54
MCF2L-230ENST00000491028 UBA6A0AVT1 1052 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-230ENST00000491028 F8W8V4 182 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 QSOX1O00391 747 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 HAUS5O94927 633 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 AP2A2O94973 939 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 AHSGP02765 367 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 CNTFP26441 200 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 HTR1BP28222 390 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 CD38P28907 300 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 SPRP35270 261 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-230ENST00000491028 SERPINB9P50453 376 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 LIMK2P53671 638 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 B4GALNT1Q00973 533 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 TMEM115Q12893 351 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-230ENST00000491028 GTF2H3Q13889 308 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 SIM2Q14190 667 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-230ENST00000491028 PTK2BQ14289 1009 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 RASA2Q15283 850 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 ZNF789Q5FWF6 425 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 ADGRG6Q86SQ4 1221 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 TRIM74Q86UV6 250 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 ZC3HC1Q86WB0 502 aaKnown RBP18.42■□□□□ 0.54
MCF2L-230ENST00000491028 TDRPQ86YL5 185 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 C1orf216Q8TAB5 229 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 TMEM109Q9BVC6 243 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 BOCQ9BWV1 1114 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 LGR4Q9BXB1 951 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 CLPBQ9H078 707 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 MIR1-1HGQ9H1L0 117 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 P2RY12Q9H244 342 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 SUSD2Q9UGT4 822 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 GNPTGQ9UJJ9 305 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 NFS1Q9Y697 457 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 COMMD10Q9Y6G5 202 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 OAS3Q9Y6K5 1087 aaKnown RBP18.42■□□□□ 0.54
MCF2L-230ENST00000491028 SPAG17Q6Q759 2223 aa18.42■□□□□ 0.54
MCF2L-230ENST00000491028 A0A1W2PR77 199 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 PRR5-ARHGAP8B1AHC4 643 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 H3BMM5 538 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 MAGEC1O60732 1142 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 MTX2O75431 263 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 ESR1P03372 595 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 ATP1B2P14415 290 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-230ENST00000491028 MAOBP27338 520 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 GABRB3P28472 473 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 GCAP28676 217 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 THOP1P52888 689 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 KHDC1Q4VXA5 237 aaKnown RBP18.41■□□□□ 0.54
MCF2L-230ENST00000491028 CNSTQ6PJW8 725 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 ADGRD1Q6QNK2 874 aa18.41■□□□□ 0.54
MCF2L-230ENST00000491028 KDM7AQ6ZMT4 941 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms