RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 SPINT3P49223 89 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 CLCNKAP51800 687 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 EPHA4P54764 986 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 DSC2Q02487 901 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 GALNT2Q10471 571 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 MMRN1Q13201 1228 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 NFATC2Q13469 925 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 PAFAH1B3Q15102 231 aaKnown RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 DEFB109BQ30KR1 87 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 ATP13A4Q4VNC1 1196 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 SNAP47Q5SQN1 464 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 PPP1R2P3Q6NXS1 205 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 H2AFVQ71UI9 128 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 GALNT13Q8IUC8 556 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 OR10G6Q8NH81 332 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 C9orf43Q8TAL5 461 aaPredicted RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 TEKT4Q8WW24 435 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 APOBEC4Q8WW27 367 aaKnown RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 STARD8Q92502 1023 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 FATE1Q969F0 183 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 BTBD6Q96KE9 485 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 C9orf72Q96LT7 481 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 TSGA13Q96PP4 275 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 PLEKHG4BQ96PX9 1271 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 TDRD1Q9BXT4 1180 aaKnown RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 THAP2Q9H0W7 228 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 NT5MQ9NPB1 228 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG5-205ENST00000489907 GOLGA6AQ9NYA3 693 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 ZNF624Q9P2J8 865 aaPredicted RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 ATXN10Q9UBB4 475 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 CPNE7Q9UBL6 633 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 SLC23A2Q9UGH3 650 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 ZNHIT2Q9UHR6 403 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 CHKBQ9Y259 395 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 TP53TG5Q9Y2B4 290 aa8.05□□□□□ -1.12
SMG5-205ENST00000489907 USP9YO00507 2555 aaPredicted RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 USP9XQ93008 2570 aaPredicted RBP8.05□□□□□ -1.12
SMG5-205ENST00000489907 SHANK1Q9Y566 2161 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 ANKRD66B4E2M5 251 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 CHUKO15111 745 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 POLR1CO15160 346 aaPredicted RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 MATN3O15232 486 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 FANCGO15287 622 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 NTRK1P04629 796 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 PYGLP06737 847 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 BRAFP15056 766 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TCN2P20062 427 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 ARL4AP40617 200 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 GARSP41250 739 aaKnown RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 SLC19A1P41440 591 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 MLLT10P55197 1068 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 GFERP55789 205 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 SLC10A2Q12908 348 aaPredicted RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 LAMB3Q13751 1172 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 FAM182AQ5T1J6 154 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 ZNF648Q5T619 568 aaPredicted RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 NCBP2-AS2Q69YL0 99 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TCTN3Q6NUS6 607 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 LYSMD3Q7Z3D4 306 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TMEM135Q86UB9 458 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 CPNE8Q86YQ8 564 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 LRRC49Q8IUZ0 686 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 FAM26EQ8N5C1 309 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 PAF1Q8N7H5 531 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 CNTD1Q8N815 330 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 NIPA2Q8N8Q9 360 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 LRRC57Q8N9N7 239 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 SLC35G2Q8TBE7 412 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 HSPH1Q92598 858 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 AHCYL2Q96HN2 611 aaKnown RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 EFHD1Q9BUP0 239 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 POLR1EQ9GZS1 481 aaKnown RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 CARD9Q9H257 536 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TRIT1Q9H3H1 467 aaKnown RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 RMI1Q9H9A7 625 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 AKIRIN1Q9H9L7 192 aaPredicted RBP8.04□□□□□ -1.12
SMG5-205ENST00000489907 UCK1Q9HA47 277 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 PRDM8Q9NQV8 689 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 SEMA5BQ9P283 1151 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TRIM10Q9UDY6 481 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 AMACRQ9UHK6 382 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TMPRSS11EQ9UL52 423 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 KCNK6Q9Y257 313 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 RPS6KL1Q9Y6S9 549 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 PCSK5Q92824 1860 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 MED13Q9UHV7 2174 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 NBASA2RRP1 2371 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 TEX15Q9BXT5 2789 aa8.04□□□□□ -1.12
SMG5-205ENST00000489907 KIR2DS5A0A0G2JLQ3 304 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 A0A0G2JNG1 304 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 BLACEA4D250 179 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 LILRA5A6NI73 299 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 KIR2DS3K7RE56 304 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 GRID2O43424 1007 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 MFSD11O43934 449 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 ASMTLO95671 621 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 RECKO95980 971 aa8.03□□□□□ -1.12
SMG5-205ENST00000489907 HLA-DQB2P05538 268 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms