RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 ANKRD20A8PQ5CZ79 823 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 NCBP2-AS2Q69YL0 99 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 HIST2H2BCQ6DN03 193 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 TIGD7Q6NT04 549 aaPredicted RBP16.74■□□□□ 0.27
TOP3B-217ENST00000489581 TMEM26Q6ZUK4 368 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 ASB18Q6ZVZ8 466 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 RASGRP3Q8IV61 690 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 CCDC13Q8IYE1 715 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 AVL9Q8NBF6 648 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 CCHCR1Q8TD31 782 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 STAMBPL1Q96FJ0 436 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 LYSMD1Q96S90 227 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
TOP3B-217ENST00000489581 TLK1Q9UKI8 766 aa16.74■□□□□ 0.27
TOP3B-217ENST00000489581 CDC14CA4D256 554 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 RASSF9O75901 435 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 UBXN7O94888 489 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 NDUFA10O95299 355 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 VIPP01282 170 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 HLA-DQB2P05538 268 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 SLC19A1P41440 591 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 SSR1P43307 286 aaKnown RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 LEPRP48357 1165 aaKnown RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 CLCNKAP51800 687 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 RPL26P61254 145 aaKnown RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 IFI16Q16666 785 aaKnown RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 PLA2G4EQ3MJ16 856 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 TDRD12Q587J7 1177 aaKnown RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 CRTC3Q6UUV7 619 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 TRIM48Q8IWZ4 208 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 MLPHQ9BV36 600 aaPredicted RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 SPATA16Q9BXB7 569 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 DTLQ9NZJ0 730 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 RCOR3Q9P2K3 495 aaPredicted RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 SLC23A2Q9UGH3 650 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 ANAPC7Q9UJX3 599 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 RPL26L1Q9UNX3 145 aaKnown RBP16.73■□□□□ 0.27
TOP3B-217ENST00000489581 ADGRG1Q9Y653 693 aa16.73■□□□□ 0.27
TOP3B-217ENST00000489581 SPTBP11277 2137 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 ANKRD66B4E2M5 251 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 KIF1CO43896 1103 aaKnown RBP16.72■□□□□ 0.27
TOP3B-217ENST00000489581 RFPL1O75677 317 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 SLC25A14O95258 325 aaPredicted RBP16.72■□□□□ 0.27
TOP3B-217ENST00000489581 CCNCP24863 283 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 GJC1P36383 396 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 PAFAH1B3Q15102 231 aaKnown RBP16.72■□□□□ 0.27
TOP3B-217ENST00000489581 SEPT7Q16181 437 aaKnown RBP16.72■□□□□ 0.27
TOP3B-217ENST00000489581 INSCQ1MX18 579 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 ATP13A4Q4VNC1 1196 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 ALS2CLQ60I27 953 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 NIPA2Q8N8Q9 360 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 EID2BQ96D98 161 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 TWSG1Q9GZX9 223 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 ZNF768Q9H5H4 540 aaKnown RBP16.72■□□□□ 0.27
TOP3B-217ENST00000489581 UCK1Q9HA47 277 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 ZNF624Q9P2J8 865 aaPredicted RBP16.72■□□□□ 0.27
TOP3B-217ENST00000489581 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 AMACRQ9UHK6 382 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 LNPEPQ9UIQ6 1025 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 KCND3Q9UK17 655 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 DNAJC16Q9Y2G8 782 aa16.72■□□□□ 0.27
TOP3B-217ENST00000489581 SHANK1Q9Y566 2161 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 PIPSLA2A3N6 862 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 RGSL1A5PLK6 1076 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 PDZK1P1A8MUH7 402 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 SPAG6O75602 509 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 CREG1O75629 220 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 PDGFAP04085 211 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 CD86P42081 329 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 UQCRFS1P47985 274 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 ARSEP51690 589 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 DPYSL3Q14195 570 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 IL11RAQ14626 422 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 FAM182AQ5T1J6 154 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 CACHD1Q5VU97 1274 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 ADGRG6Q86SQ4 1221 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 GPR26Q8NDV2 337 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 FAM71BQ8TC56 605 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 RSC1A1Q92681 617 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 TSGA13Q96PP4 275 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 NUP85Q9BW27 656 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 TRIM39Q9HCM9 518 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 HAUS2Q9NVX0 235 aa16.71■□□□□ 0.27
TOP3B-217ENST00000489581 TOX3O15405 576 aaPredicted RBP16.7■□□□□ 0.26
TOP3B-217ENST00000489581 DNAJB5O75953 348 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 MTA2O94776 668 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 MMP2P08253 660 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 CCNYL3P0C7X3 344 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 ZNF7P17097 686 aaPredicted RBP16.7■□□□□ 0.26
TOP3B-217ENST00000489581 RPL10P27635 214 aaKnown RBP16.7■□□□□ 0.26
TOP3B-217ENST00000489581 DNASE1L3Q13609 305 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 GALNT3Q14435 633 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 HADHQ16836 314 aaKnown RBP16.7■□□□□ 0.26
TOP3B-217ENST00000489581 ZNF569Q5MCW4 686 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 FAM92BQ6ZTR7 304 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 CPNE8Q86YQ8 564 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
TOP3B-217ENST00000489581 FATE1Q969F0 183 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms