RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 IGLV5-37A0A075B6J1 123 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 EIF4E1BA6NMX2 242 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 FAM90A26D6RGX4 464 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MAP2K7O14733 419 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ANKRD28O15084 1053 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SMAD9O15198 467 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SPINT2O43291 252 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MITFO75030 526 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 DAB1O75553 588 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 RFPL2O75678 378 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 TSPAN9O75954 239 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 WISP2O76076 250 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 CAMTA2O94983 1202 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 PMS2P2O95744 297 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 STARD3NLO95772 234 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ADRB2P07550 413 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 FCGR1AP12314 374 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SRCP12931 536 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 HLA-DOBP13765 273 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MYOD1P15172 320 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM11P17152 192 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ITGA2P17301 1181 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MMP14P50281 582 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 CLCNKAP51800 687 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 DSCR9P59020 149 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ISL1P61371 349 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MRPS5P82675 430 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 RPL36AP83881 106 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 PPP2R2BQ00005 443 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 TFAP4Q01664 338 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 EGR4Q05215 589 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 RUNX1T1Q06455 604 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 FOXM1Q08050 763 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SLC20A2Q08357 652 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 KIF5AQ12840 1032 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 DLG1Q12959 904 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 KEAP1Q14145 624 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 HLFQ16534 295 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 KRTCAP3Q53RY4 240 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 DCST1Q5T197 706 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 C18orf63Q68DL7 685 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 PAPD4Q6PIY7 484 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 BRAT1Q6PJG6 821 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ARMC9Q7Z3E5 817 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 RBM23Q86U06 439 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF329Q86UD4 541 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 CCDC190Q86UF4 302 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SPATA2LQ8IUW3 424 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 CEP97Q8IW35 865 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 C1orf87Q8N0U7 546 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 TAGAPQ8N103 731 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF441Q8N8Z8 693 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 LILRB1Q8NHL6 650 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 NUDCD2Q8WVJ2 157 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 TAAR8Q969N4 342 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MED30Q96HR3 178 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MTERF1Q99551 399 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 NCAPGQ9BPX3 1015 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 MMTAG2Q9BU76 263 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SEZ6LQ9BYH1 1024 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 DNAJC18Q9H819 358 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 CLIC5Q9NZA1 410 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 TSPYL4Q9UJ04 414 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 PLAGL1Q9UM63 463 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 KLHL20Q9Y2M5 609 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 RABGAP1Q9Y3P9 1069 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 LOXL2Q9Y4K0 774 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 SNX8Q9Y5X2 465 aa2.82□□□□□ -1.96
R3HDM1-219ENST00000488035 A0A1W2PP11 408 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 KANSL1LA0AUZ9 987 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 LNP1A1A4G5 178 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 HMGB1P1B2RPK0 211 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GRID2O43424 1007 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 FIBPO43427 364 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF217O75362 1048 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GAGE7O76087 117 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 PAPSS2O95340 614 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 CGAP01215 116 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 HIST1H2ABP04908 130 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GAGE12FP0CL80 117 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GAGE12GP0CL81 117 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GAGE12IP0CL82 117 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 TRIM21P19474 475 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 HIST1H2ADP20671 130 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 UGT1A1P22309 533 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 HRH2P25021 359 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 HSD17B4P51659 736 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 RRP1P56182 461 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 TUBA1BP68363 451 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 COG7P83436 770 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GAGE1Q13065 139 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GAGE4Q13068 117 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 MAD2L1Q13257 205 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 KCTD2Q14681 263 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 SF3B4Q15427 424 aaKnown RBP eCLIP2.81□□□□□ -1.968e-7■■■■□ 23.2
R3HDM1-219ENST00000488035 CALCRLQ16602 461 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 CCDC96Q2M329 555 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 PRSS57Q6UWY2 283 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 GFRALQ6UXV0 394 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms