RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 P2RY11Q96G91 374 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 LRRC3BQ96PB8 259 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 FNBP1Q96RU3 617 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 GAD1Q99259 594 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 MXRA8Q9BRK3 442 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 TUBB6Q9BUF5 446 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 TTLL2Q9BWV7 592 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 GPR88Q9GZN0 384 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 RNF41Q9H4P4 317 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-217ENST00000487825 SEMA4BQ9NPR2 832 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-217ENST00000487825 MIOSQ9NXC5 875 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 MTRRQ9UBK8 725 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF580Q9UK33 172 aa4.89□□□□□ -1.63
BRCA1-217ENST00000487825 OTOGQ6ZRI0 2925 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ANAPC1Q9H1A4 1944 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 MYH10P35580 1976 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ADGRG4Q8IZF6 3080 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 IGLV5-39A0A0G2JS06 123 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CLEC18AA5D8T8 446 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 DDX39AO00148 427 aaKnown RBP4.88□□□□□ -1.63
BRCA1-217ENST00000487825 PLK4O00444 970 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 HMMRO75330 724 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 TADA2AO75478 443 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 TOMM40O96008 361 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 VIPP01282 170 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 IDEP14735 1019 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 GJA1P17302 382 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 TFEBP19484 476 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 MATN1P21941 496 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 GABRB3P28472 473 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 SLC5A2P31639 672 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CCKBRP32239 447 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 KIF5BP33176 963 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 P2RY2P41231 377 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 STAT6P42226 847 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 SOX2P48431 317 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 HTR6P50406 440 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF84P51523 738 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 GRIK3Q13003 919 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ATP1A4Q13733 1029 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 TEAD2Q15562 447 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ITPRIPL2Q3MIP1 535 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CYP4A22Q5TCH4 519 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ACSM6Q6P461 480 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF549Q6P9A3 640 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 DHRS13Q6UX07 377 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CLEC18BQ6UXF7 455 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 PIK3AP1Q6ZUJ8 805 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CEP57Q86XR8 500 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
BRCA1-217ENST00000487825 TXLNBQ8N3L3 684 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CLEC18CQ8NCF0 446 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 OR52L2PQ8NGH6 319 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 OVCA2Q8WZ82 227 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 GJA10Q969M2 543 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CACNG4Q9UBN1 327 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 CITO14578 2027 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 NF1P21359 2839 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 NID2Q14112 1375 aa4.88□□□□□ -1.63
BRCA1-217ENST00000487825 NBASA2RRP1 2371 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 F8P00451 2351 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 MYOFQ9NZM1 2061 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 IGKV6-21A0A0C4DH24 114 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 TMEM272A0A1B0GTI8 110 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF814B7Z6K7 855 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 M0QZQ0 153 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 PRRG1O14668 218 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 NDUFB8O95169 186 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 KRT10P13645 584 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 EGR1P18146 543 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 HOXA11P31270 313 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 SLC8A1P32418 973 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 TMPRSS3P57727 454 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 SEMG2Q02383 582 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 PMS2P11Q13670 270 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ARL13BQ3SXY8 428 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 CEP55Q53EZ4 464 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 C9orf47Q6ZRZ4 202 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 TRMT1LQ7Z2T5 733 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 RHPN2Q8IUC4 686 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ARID3BQ8IVW6 561 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 GLIS1Q8NBF1 620 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ZNF461Q8TAF7 563 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 SNRNP27Q8WVK2 155 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 MARK4Q96L34 752 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 PAAF1Q9BRP4 392 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 TRIM2Q9C040 744 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 CDCP1Q9H5V8 836 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 METTL14Q9HCE5 456 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 FBRSL1Q9HCM7 1045 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 TMEM8AQ9HCN3 771 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 ASAH2Q9NR71 780 aa4.87□□□□□ -1.63
BRCA1-217ENST00000487825 PAPOLBQ9NRJ5 636 aaKnown RBP4.87□□□□□ -1.63
BRCA1-217ENST00000487825 IPO11Q9UI26 975 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms