RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZNF23P17027 643 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 KRT9P35527 623 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 CPOXP36551 454 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 CDC16Q13042 620 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 MAD2L1Q13257 205 aaPredicted RBP3.81□□□□□ -1.8
SMC4-219ENST00000487747 OS9Q13438 667 aaPredicted RBP3.81□□□□□ -1.8
SMC4-219ENST00000487747 ITGA9Q13797 1035 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 GPR68Q15743 365 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 MYLK3Q32MK0 819 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 CDONQ4KMG0 1287 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 SPAG16Q8N0X2 631 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 PSPC1Q8WXF1 523 aaKnown RBP3.81□□□□□ -1.8
SMC4-219ENST00000487747 RRNAD1Q96FB5 475 aaKnown RBP3.81□□□□□ -1.8
SMC4-219ENST00000487747 OPRPNQ99935 248 aaPredicted RBP3.81□□□□□ -1.8
SMC4-219ENST00000487747 RAD21L1Q9H4I0 556 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 RPS10P5Q9NQ39 176 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 ASAH2Q9NR71 780 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 PCDHB16Q9NRJ7 776 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 PPP1R14DQ9NXH3 145 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 OGFRQ9NZT2 677 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 ABI3Q9P2A4 366 aa3.81□□□□□ -1.8
SMC4-219ENST00000487747 FLT1P17948 1338 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 A0A0G2JNG1 304 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 MCCP23508 829 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 ABCD1P33897 745 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 FOXD4Q12950 439 aaPredicted RBP3.8□□□□□ -1.8
SMC4-219ENST00000487747 PTP4A2Q12974 167 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 KIR2DS5Q14953 304 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 GSTA3Q16772 222 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 FFAR4Q5NUL3 377 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 FAM69AQ5T7M9 428 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 SLC9C2Q5TAH2 1124 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 LYG1Q8N1E2 194 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 ZNF843Q8N446 348 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
SMC4-219ENST00000487747 GTF3C6Q969F1 213 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 ABHD8Q96I13 439 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 UBXN10Q96LJ8 280 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 VGLL1Q99990 258 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 SLX1AQ9BQ83 275 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 SLC25A18Q9H1K4 315 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 WDR13Q9H1Z4 485 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 INTS10Q9NVR2 710 aaKnown RBP3.8□□□□□ -1.8
SMC4-219ENST00000487747 C2orf42Q9NWW7 574 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 PTTG2Q9NZH5 202 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 HAO1Q9UJM8 370 aa3.8□□□□□ -1.8
SMC4-219ENST00000487747 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 TSPAN4O14817 238 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 PDE9AO76083 593 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 NKX2-2O95096 273 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 TFAP2AP05549 437 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 UBA1P22314 1058 aaKnown RBP3.79□□□□□ -1.8
SMC4-219ENST00000487747 HOXA13P31271 388 aaPredicted RBP3.79□□□□□ -1.8
SMC4-219ENST00000487747 HOXC9P31274 260 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 ELF1P32519 619 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 NR2C2P49116 596 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 MLLT10P55197 1068 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 NEXNQ0ZGT2 675 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 BIRC2Q13490 618 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 KIAA1644Q3SXP7 199 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 NSUN5P2Q63ZY6 315 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 MFSD6Q6ZSS7 791 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 GBGT1Q8N5D6 347 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 DDHD1Q8NEL9 900 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 HVCN1Q96D96 273 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 UBXN6Q9BZV1 441 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 TRIM15Q9C019 465 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 VEZTQ9HBM0 779 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 ZBTB20Q9HC78 741 aaPredicted RBP3.79□□□□□ -1.8
SMC4-219ENST00000487747 SIX2Q9NPC8 291 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 COPG2Q9UBF2 871 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 OR14J1Q9UGF5 321 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.79□□□□□ -1.87e-44■■■■■ 137.4
SMC4-219ENST00000487747 GJD2Q9UKL4 321 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 TBX20Q9UMR3 447 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 COMMD10Q9Y6G5 202 aa3.79□□□□□ -1.8
SMC4-219ENST00000487747 A0A0J9YWU9 116 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 MAGEB17A8MXT2 336 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 PLOD2O00469 737 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 SH2B2O14492 632 aaPredicted RBP3.78□□□□□ -1.8
SMC4-219ENST00000487747 ARHGEF9O43307 516 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 KRT19P08727 400 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 IGHV4-38-2P0DP08 117 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 ZNF182P17025 639 aaPredicted RBP3.78□□□□□ -1.8
SMC4-219ENST00000487747 NR2F2P24468 414 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 IRX6P78412 446 aaPredicted RBP3.78□□□□□ -1.8
SMC4-219ENST00000487747 TLE2Q04725 743 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 TAF12Q16514 161 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 RAB6CQ53S08 254 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 BHLHB9Q6PI77 547 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 SH2D5Q6ZV89 423 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 LONP2Q86WA8 852 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 ANKRD18AQ8IVF6 992 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 ZNF440Q8IYI8 595 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 TRIM63Q969Q1 353 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 RNF125Q96EQ8 232 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 PRMT6Q96LA8 375 aaPredicted RBP3.78□□□□□ -1.8
SMC4-219ENST00000487747 RAB6CQ9H0N0 254 aa3.78□□□□□ -1.8
SMC4-219ENST00000487747 PPCSQ9HAB8 311 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms