RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TMED8Q6PL24 325 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 TMCO3Q6UWJ1 677 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 SFR1Q86XK3 245 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 PCDH20Q8N6Y1 951 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 APBB2Q92870 758 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 ADGRG7Q96K78 797 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 MTERF1Q99551 399 aaKnown RBP3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 SEMA3CQ99985 751 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 KIFC3Q9BVG8 833 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 RTN4RQ9BZR6 473 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 DNAJC18Q9H819 358 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 SMARCAL1Q9NZC9 954 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 MORF4L1Q9UBU8 362 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 PCDHGB4Q9UN71 923 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 CLIC4Q9Y696 253 aa3.72□□□□□ -1.81
HMGB1P36-201ENST00000487709 C15orf62A8K5M9 175 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 IFNL4K9M1U5 179 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 TCERG1O14776 1098 aaKnown RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 SLC16A5O15375 505 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 KCNN4O15554 427 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 AHCYL1O43865 530 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 AVILO75366 819 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 BEST1O76090 585 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 GH2P01242 217 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 NR2F2P24468 414 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 TUBA1BP68363 451 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 CDC16Q13042 620 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 KCTD2Q14681 263 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 DECR1Q16698 335 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 TMEM35AQ53FP2 167 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 LRIF1Q5T3J3 769 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 PMS2CLQ68D20 193 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 KIAA0930Q6ICG6 404 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 TRNP1Q6NT89 227 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 PAPD4Q6PIY7 484 aaKnown RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 ENOSF1Q7L5Y1 443 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 GALNT5Q7Z7M9 940 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 SCYL3Q8IZE3 742 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 RNF113BQ8IZP6 322 aaKnown RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 CLIP4Q8N3C7 705 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 EMC1Q8N766 993 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 POMGNT2Q8NAT1 580 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 GSDMBQ8TAX9 411 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 HM13Q8TCT9 377 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 PRPF31Q8WWY3 499 aaKnown RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 CEP295NLQ96MC4 621 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 DUX5Q96PT3 197 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 GAD1Q99259 594 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 C6orf106Q9H6K1 298 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 CD93Q9NPY3 652 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 KLHL20Q9Y2M5 609 aa3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.71□□□□□ -1.82
HMGB1P36-201ENST00000487709 RUSC2Q8N2Y8 1516 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 A6NL46 340 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 A8MV72 311 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 H0YIN7 160 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 ZBTB43O43298 467 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 ICAM1P05362 532 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 POLR2CP19387 275 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 SSTR2P30874 369 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 AMPHP49418 695 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 ART1P52961 327 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 SNTA1Q13424 505 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 MEP1AQ16819 746 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 IZUMO4Q1ZYL8 232 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 FAM69BQ5VUD6 431 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 IRAK1BP1Q5VVH5 260 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 RHBDF2Q6PJF5 856 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 ZNF704Q6ZNC4 412 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 CFAP77Q6ZQR2 320 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 PLEKHM3Q6ZWE6 761 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 RBM23Q86U06 439 aaKnown RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 PRPF39Q86UA1 669 aaKnown RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 TSPAN33Q86UF1 283 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 DNAAF5Q86Y56 855 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 RDM1Q8NG50 284 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 LMO3Q8TAP4 145 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 UTP15Q8TED0 518 aaKnown RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 TANKQ92844 425 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 ERLEC1Q96DZ1 483 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 CDCA5Q96FF9 252 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 TMEM19Q96HH6 336 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 DACH2Q96NX9 599 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 CMKLR1Q99788 373 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 MXD3Q9BW11 206 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 RAD21L1Q9H4I0 556 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 FKRPQ9H9S5 495 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 CHMP1AQ9HD42 196 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 MMP25Q9NPA2 562 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 NOX4Q9NPH5 578 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 OCIAD1Q9NX40 245 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 TAB2Q9NYJ8 693 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 MALT1Q9UDY8 824 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 POU2F3Q9UKI9 436 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 PASKQ96RG2 1323 aa3.7□□□□□ -1.82
HMGB1P36-201ENST00000487709 IGLV5-52A0A0A0MRZ9 124 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 PLSCR5A0PG75 271 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 SERINC4A6NH21 518 aa3.69□□□□□ -1.82
HMGB1P36-201ENST00000487709 GLOD5A6NK44 160 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms