RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.24■■□□□ 1.47
LIME1-206ENST00000487026 F5H423 210 aaPredicted RBP24.24■■□□□ 1.47
LIME1-206ENST00000487026 MTX2O75431 263 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 NDST3O95803 873 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 CD68P34810 354 aaPredicted RBP24.24■■□□□ 1.47
LIME1-206ENST00000487026 NOMO1Q15155 1222 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 CCDC70Q6NSX1 233 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 SPOCD1Q6ZMY3 1216 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 PHYKPLQ8IUZ5 450 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 CCDC112Q8NEF3 446 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 TFB1MQ8WVM0 346 aaKnown RBP24.24■■□□□ 1.47
LIME1-206ENST00000487026 NKD1Q969G9 470 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 GLYATL1Q969I3 302 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 HERPUD2Q9BSE4 406 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 TBC1D10AQ9BXI6 508 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 STN1Q9H668 368 aaKnown RBP24.24■■□□□ 1.47
LIME1-206ENST00000487026 SCHIP1Q9P0W5 487 aaPredicted RBP24.24■■□□□ 1.47
LIME1-206ENST00000487026 CPNE7Q9UBL6 633 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 KLHL3Q9UH77 587 aa24.24■■□□□ 1.47
LIME1-206ENST00000487026 MAGEA1P43355 309 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 NR2C2P49116 596 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 DCDC1P59894 354 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 WASHC5Q12768 1159 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 TFDP2Q14188 446 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 TAZQ16635 292 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 ANKS6Q68DC2 871 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 WDR74Q6RFH5 385 aaPredicted RBP24.23■■□□□ 1.47
LIME1-206ENST00000487026 ZSCAN1Q8NBB4 408 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 SH3KBP1Q96B97 665 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 PLEKHG4BQ96PX9 1271 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 CTRCQ99895 268 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 RAD18Q9NS91 495 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 TMPRSS11EQ9UL52 423 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 DNAJC16Q9Y2G8 782 aa24.23■■□□□ 1.47
LIME1-206ENST00000487026 KIR2DS5A0A0G2JLQ3 304 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 A0A0G2JNG1 304 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 B8ZZF3 427 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 KIR2DS3K7RE56 304 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 SLC2A4P14672 509 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 NFKB1P19838 968 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 UGT1A3P35503 534 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 KIR2DS5Q14953 304 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 SLC14A2Q15849 920 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 KHDC1Q4VXA5 237 aaKnown RBP24.22■■□□□ 1.47
LIME1-206ENST00000487026 BZW1Q7L1Q6 419 aaKnown RBP24.22■■□□□ 1.47
LIME1-206ENST00000487026 ARHGAP22Q7Z5H3 698 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 ZC3H18Q86VM9 953 aaKnown RBP24.22■■□□□ 1.47
LIME1-206ENST00000487026 BMPERQ8N8U9 685 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 HAUS1Q96CS2 278 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 ARHGAP9Q9BRR9 750 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 ANP32EQ9BTT0 268 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 DDA1Q9BW61 102 aa24.22■■□□□ 1.47
LIME1-206ENST00000487026 B4E171 279 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 CHUKO15111 745 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 TSPAN7P41732 249 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 MARCKSL1P49006 195 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 CLCNKAP51800 687 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 SEPT7Q16181 437 aaKnown RBP24.21■■□□□ 1.47
LIME1-206ENST00000487026 INSCQ1MX18 579 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 DCAF12Q5T6F0 453 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 SLC25A41Q8N5S1 370 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 HTR3CQ8WXA8 447 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 ASPSCR1Q9BZE9 553 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 NFKBIL1Q9UBC1 381 aaPredicted RBP24.21■■□□□ 1.47
LIME1-206ENST00000487026 FAM153AQ9UHL3 310 aa24.21■■□□□ 1.47
LIME1-206ENST00000487026 OR5K4A6NMS3 321 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 PSTPIP1O43586 416 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 ZNF7P17097 686 aaPredicted RBP24.2■■□□□ 1.46
LIME1-206ENST00000487026 ATP1A2P50993 1020 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 WNT3AP56704 352 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 UBE2IP63279 158 aaKnown RBP24.2■■□□□ 1.46
LIME1-206ENST00000487026 TBR1Q16650 682 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 ATP13A5Q4VNC0 1218 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 PDPK2PQ6A1A2 396 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 KDELC1Q6UW63 502 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 LRRTM4Q86VH4 590 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 ZNF547Q8IVP9 402 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 IL22RA1Q8N6P7 574 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 TC2NQ8N9U0 490 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 P3H4Q92791 437 aa24.2■■□□□ 1.46
LIME1-206ENST00000487026 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.2■■□□□ 1.46
LIME1-206ENST00000487026 KLHL8Q9P2G9 620 aaPredicted RBP24.2■■□□□ 1.46
LIME1-206ENST00000487026 TENM4Q6N022 2769 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 LOC285095A0A1B0GVY8 99 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 PYCARD-AS1I3L0S3 204 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 KMOO15229 486 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 CDK14O94921 469 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 ITGB2P05107 769 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 FAM87AP0C7U9 286 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 SLC19A1P41440 591 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 CHRNA4P43681 627 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 EPHA4P54764 986 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 TFDP3Q5H9I0 405 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 SIRPB2Q5JXA9 342 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 CACNA2D3Q8IZS8 1091 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 ZNF567Q8N184 647 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 OXNAD1Q96HP4 312 aaPredicted RBP24.19■■□□□ 1.46
LIME1-206ENST00000487026 TRIM5Q9C035 493 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 APMAPQ9HDC9 416 aa24.19■■□□□ 1.46
LIME1-206ENST00000487026 ZNF624Q9P2J8 865 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms