RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 UBLCP1Q8WVY7 318 aaPredicted RBP5.51□□□□□ -1.53
SF1-217ENST00000486960 FAM151AQ8WW52 585 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 AZIN2Q96A70 460 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TMCO6Q96DC7 493 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 CHMP6Q96FZ7 201 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 ZDHHC12Q96GR4 267 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 C5orf30Q96GV9 206 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TRNT1Q96Q11 434 aaKnown RBP5.51□□□□□ -1.53
SF1-217ENST00000486960 CYTH2Q99418 400 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 JPH2Q9BR39 696 aaPredicted RBP5.51□□□□□ -1.53
SF1-217ENST00000486960 ADI1Q9BV57 179 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TRIM54Q9BYV2 358 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 RTN4RQ9BZR6 473 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 PKIBQ9C010 78 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TMEM117Q9H0C3 514 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 SLC26A1Q9H2B4 701 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 VCX2Q9H322 139 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 SLC32A1Q9H598 525 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 SMURF1Q9HCE7 757 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 BRD7Q9NPI1 651 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TMEM140Q9NV12 185 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 KLHL28Q9NXS3 571 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 SH3BP4Q9P0V3 963 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 COPG2Q9UBF2 871 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 CA14Q9ULX7 337 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 ERVK-19Q9WJR5 959 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 SF3B6Q9Y3B4 125 aaKnown RBP5.51□□□□□ -1.53
SF1-217ENST00000486960 PCDHB2Q9Y5E7 798 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TEX264Q9Y6I9 313 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 CELSR2Q9HCU4 2923 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 PLXNA4Q9HCM2 1894 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 TSC2P49815 1807 aa5.51□□□□□ -1.53
SF1-217ENST00000486960 ELP1O95163 1332 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 F8P00451 2351 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 DENND4AQ7Z401 1863 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CYP3A7-CYP3A51PA0A087WV96 503 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 A0A1B0GTQ1 180 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 FAM237BA0A1B0GVD1 139 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PRSS38A1L453 326 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 TRIM49BA6NDI0 452 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 HIP1O00291 1037 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PEX12O00623 359 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PRRG1O14668 218 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 EIF3DO15371 548 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF1-217ENST00000486960 TLX2O43763 284 aaPredicted RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 PEX1O43933 1283 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CCNT1O60563 726 aaKnown RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 LILRB5O75023 590 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CBFA2T3O75081 653 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 GCATO75600 419 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CBR3O75828 277 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 OR2C1O95371 312 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 LGI1O95970 557 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 GLAP06280 429 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ABHD2P08910 425 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 TMEM253P0C7T8 217 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ZCCHC18P0CG32 403 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 AREGP15514 252 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 MYF6P23409 242 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CYP3A7P24462 503 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ADRA1DP25100 572 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CD1BP29016 333 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PTGIRP43119 386 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 OAZ1P54368 228 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PDE1AP54750 535 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 JAM2P57087 298 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ST8SIA6P61647 398 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 WDR5P61964 334 aaKnown RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 TUBA4AP68366 448 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 GPLD1P80108 840 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ATP2C1P98194 919 aaPredicted RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 PPARAQ07869 468 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 SPIRE1Q08AE8 756 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 SLC13A2Q13183 592 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 IL18Q14116 193 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 BOP1Q14137 746 aaKnown RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 ZNF273Q14593 569 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CASP8Q14790 479 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 EPHA7Q15375 998 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CEBPEQ15744 281 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 BCL2A1Q16548 175 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PCGF3Q3KNV8 242 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 EPC2Q52LR7 807 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 TRIM65Q6PJ69 517 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CES3Q6UWW8 571 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 RBPMS2Q6ZRY4 209 aaKnown RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 STXBP4Q6ZWJ1 553 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 TRAPPC11Q7Z392 1133 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 SPATA21Q7Z572 469 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ZNF605Q86T29 641 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 BIVMQ86UB2 503 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 KBTBD6Q86V97 674 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 NUDT13Q86X67 352 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CRYBG2Q8N1P7 616 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 IL17RCQ8NAC3 791 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CAMKVQ8NCB2 501 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 STEAP2Q8NFT2 490 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 OR2T34Q8NGX1 318 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 B4GALNT2Q8NHY0 566 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms