RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ABCB10Q9NRK6 738 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 POLR3BQ9NW08 1133 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 SUN2Q9UH99 717 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 GSTA4O15217 222 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 MTSS1O43312 755 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 OR1I1O60431 355 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 GPR32O75388 356 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CYBBP04839 570 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 PSMB9P28065 219 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 GRIK1P39086 918 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 ARSFP54793 590 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 IL5RAQ01344 420 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 SNX17Q15036 470 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 SMN1Q16637 294 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 CTU2Q2VPK5 515 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 ANKRD46Q86W74 232 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 APOBEC3FQ8IUX4 373 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 SLC22A15Q8IZD6 547 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 LINC01465Q8N7H1 131 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 EFHBQ8N7U6 833 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 MFSD2AQ8NA29 543 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 FCRL5Q96RD9 977 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 NFKBIZQ9BYH8 718 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 AGO3Q9H9G7 860 aaKnown RBP12.29□□□□□ -0.44
HSPG2-211ENST00000486901 SP110Q9HB58 689 aa12.29□□□□□ -0.44
HSPG2-211ENST00000486901 LINC00854A0A1B0GVQ3 168 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NADKO95544 446 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 OXSR1O95747 527 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SMIM10L2AP0DMW4 78 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SMIM10L2BP0DMW5 78 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 MTHFD2P13995 350 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 EFNA1P20827 205 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 CSRP3P50461 194 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NCS1P62166 190 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 PTGR1Q14914 329 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 MOGQ16653 247 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SIRPB2Q5JXA9 342 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 LRRTM3Q86VH5 581 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 DCP1BQ8IZD4 617 aaKnown RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 CADM3Q8N126 398 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 FAR2Q96K12 515 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 UBXN10Q96LJ8 280 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 HGH1Q9BTY7 390 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 TDRD1Q9BXT4 1180 aaKnown RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NOL6Q9H6R4 1146 aaKnown RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 TLR9Q9NR96 1032 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 A0A1W2PQ67 120 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SYCE1LA8MT33 242 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 MATN3O15232 486 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 DFNA5O60443 496 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 CLPXO76031 633 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 C1QCP02747 245 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SLC2A3P11169 496 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 CD1DP15813 335 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 HPCAL1P37235 193 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 MASP1P48740 699 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 DNAJB13P59910 316 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NKG7Q16617 165 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 ATP6AP1LQ52LC2 224 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 XAF1Q6GPH4 301 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 BNIPLQ7Z465 357 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SYVN1Q86TM6 617 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 HEATR4Q86WZ0 1026 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NTN4Q9HB63 628 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NMUR1Q9HB89 426 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 ENTPD7Q9NQZ7 604 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SARDHQ9UL12 918 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 PCDHA9Q9Y5H5 950 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 HTR3EA5X5Y0 456 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SNX2O60749 519 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SLC22A3O75751 556 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 CST1P01037 141 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 ITGB1P05556 798 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 POLR2JP52435 117 aaKnown RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 GTF2H3Q13889 308 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 BTG3Q14201 252 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 PSMD5Q16401 504 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 DDR2Q16832 855 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 TIGD5Q53EQ6 642 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 BROXQ5VW32 411 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 KIAA0930Q6ICG6 404 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-211ENST00000486901 BLOC1S3Q6QNY0 202 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 RNF19BQ6ZMZ0 732 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 SPARTQ8N0X7 666 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 BHMTQ93088 406 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 GPR21Q99679 349 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 PCDHGA11Q9Y5H2 935 aa12.28□□□□□ -0.44
HSPG2-211ENST00000486901 AQP12BA6NM10 295 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 MYO1GB0I1T2 1018 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms