RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TPGS2Q68CL5 300 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 CYP2R1Q6VVX0 501 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 GPSM1Q86YR5 675 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 GALNT4Q8N4A0 578 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 CARNMT1Q8N4J0 409 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 LRTOMTQ8WZ04 291 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 EME1Q96AY2 570 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 LRCH3Q96II8 777 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 FNDC3AQ9Y2H6 1198 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 TIMM22Q9Y584 194 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 GPR45Q9Y5Y3 372 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 SCN5AQ14524 2016 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 E5RI56 91 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 NME4O00746 187 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 FZD6O60353 706 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 TBL1XO60907 577 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 LATS1O95835 1130 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 CHEK2O96017 543 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 CXCL10P02778 98 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF26P17031 533 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 CHRM3P20309 590 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 PRDX3P30048 256 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 RHOAP61586 193 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 XKR7Q5GH72 579 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 BLOC1S3Q6QNY0 202 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 STK40Q8N2I9 435 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 OR56A4Q8NGH8 313 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 TSPEARQ8WU66 669 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 HGH1Q9BTY7 390 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 EFHD1Q9BUP0 239 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC52A3Q9NQ40 469 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 GID8Q9NWU2 228 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 SMPD4Q9NXE4 827 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 IL17CQ9P0M4 197 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF225Q9UK10 706 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 ZNF711Q9Y462 761 aa17.82■□□□□ 0.44
PDLIM7-207ENST00000486828 SNX2O60749 519 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 SMIM18P0DKX4 95 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 GJA8P48165 433 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 CDKL1Q00532 357 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 CACNG1Q06432 222 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 FOXM1Q08050 763 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 TWF1Q12792 350 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 GRIK2Q13002 908 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 VEPH1Q14D04 833 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 RBBP7Q16576 425 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 PITRM1Q5JRX3 1037 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 C6orf52Q5T4I8 152 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 UGT3A1Q6NUS8 523 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 TAS2R42Q7RTR8 314 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 CPNE9Q8IYJ1 553 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 OR2T34Q8NGX1 318 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 OR2T3Q8NH03 318 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 ZUFSPQ96AP4 578 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 ZFRQ96KR1 1074 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 CNBD2Q96M20 576 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 FEM1AQ9BSK4 669 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 SPATA16Q9BXB7 569 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 P2RY12Q9H244 342 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 IL1RL2Q9HB29 575 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 AIG1Q9NVV5 245 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 CD274Q9NZQ7 290 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 PKP3Q9Y446 797 aa17.81■□□□□ 0.44
PDLIM7-207ENST00000486828 A0A0U1RQS6 177 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 FXYD1O00168 92 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 E2F3O00716 465 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 CYBBP04839 570 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 PABPC4LP0CB38 370 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 MBL2P11226 248 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 HSD17B1P14061 328 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 MNX1P50219 401 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 DIO3P55073 304 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SMAD3P84022 425 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC15A3Q8IY34 581 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 AHI1Q8N157 1196 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SEMA6AQ9H2E6 1030 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 MAGEE1Q9HCI5 957 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 PFDN4Q9NQP4 134 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 PAPOLBQ9NRJ5 636 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 GMPR2Q9P2T1 348 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 CNOT6Q9ULM6 557 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 FCF1Q9Y324 198 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 PCDHB9Q9Y5E1 797 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 OR51B4Q9Y5P0 310 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 C9JVG2 144 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 GIPC1O14908 333 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 PQBP1O60828 265 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SOD2P04179 222 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 ATP6V1B2P21281 511 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 CLCN7P51798 805 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 CCL23P55773 120 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 SLC30A9Q6PML9 568 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 GPRIN3Q6ZVF9 776 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 HJURPQ8NCD3 748 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 ABHD8Q96I13 439 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 COQ10BQ9H8M1 238 aa17.8■□□□□ 0.44
PDLIM7-207ENST00000486828 ARMC1Q9NVT9 282 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms