RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 L3HYPDHQ96EM0 354 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 TEKT5Q96M29 485 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 RDH12Q96NR8 316 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 MID1IP1Q9NPA3 183 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 BTRCQ9Y297 605 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 GPR45Q9Y5Y3 372 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 LOC105371267A0A1B0GV96 52 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 FAM92AA1XBS5 289 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 LRRC14BA6NHZ5 514 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CCDC154A6NI56 674 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 M0QYT0 321 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 SNX2O60749 519 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 DAB1O75553 588 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 C1RP00736 705 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CYP2C8P10632 490 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PRKACGP22612 351 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ACADSBP45954 432 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CLCNKBP51801 687 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 KCNK10P57789 538 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PPP2R2BQ00005 443 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 TNFAIP2Q03169 654 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 EMX2Q04743 252 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 MBTD1Q05BQ5 628 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 NPTX1Q15818 432 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 FXNQ16595 210 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF691Q5VV52 312 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CCDC81Q6ZN84 652 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PRSS48Q7RTY5 328 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 REM2Q8IYK8 340 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ABI1Q8IZP0 508 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 METTL4Q8N3J2 472 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 TTC39CQ8N584 583 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PJA1Q8NG27 643 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ITFG1Q8TB96 612 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 FRS2Q8WU20 508 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ITCHQ96J02 903 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 C12orf42Q96LP6 360 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ASB7Q9H672 318 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CARS2Q9HA77 564 aaKnown RBP10.57□□□□□ -0.72
CCDC171-208ENST00000486641 CNGB3Q9NQW8 809 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 OPTCQ9UBM4 332 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 AASSQ9UDR5 926 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 POLG2Q9UHN1 485 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF221Q9UK13 617 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 FBXO10Q9UK96 956 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
CCDC171-208ENST00000486641 PARP14Q460N5 1801 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ZBTB42B2RXF5 422 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 AZIN1O14977 448 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 AREL1O15033 823 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 TULP3O75386 442 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 EEDO75530 441 aaKnown RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 CNTN5O94779 1100 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 SIX3O95343 332 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PTTG1O95997 202 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 MT-CYBP00156 380 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ABCB1P08183 1280 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 FGF4P08620 206 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PSMB9P28065 219 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 KRT6CP48668 564 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 UFM1P61960 85 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 CHRNB3Q05901 458 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 EPS8Q12929 822 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 CLCA4Q14CN2 919 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 STXBP2Q15833 593 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 FAM98BQ52LJ0 330 aaKnown RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ATAD3CQ5T2N8 411 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 TMEM207Q6UWW9 146 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 C11orf74Q86VG3 221 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PLD3Q8IV08 490 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 DTWD1Q8N5C7 304 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 FAM86B1Q8N7N1 296 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 BEND7Q8N7W2 519 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 OR6F1Q8NGZ6 308 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 TRAPPC12Q8WVT3 735 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 MED30Q96HR3 178 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF560Q96MR9 790 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 GAD1Q99259 594 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 FAM49AQ9H0Q0 323 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 NUDT5Q9UKK9 219 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ANGPTL3Q9Y5C1 460 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 AGAP5A6NIR3 686 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PRMT5O14744 637 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PPEF2O14830 753 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 USP2O75604 605 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 CST1P01037 141 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 CCDC159P0C7I6 412 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 UBA1P22314 1058 aaKnown RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 FMO3P31513 532 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ICAM3P32942 547 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 SCNN1AP37088 669 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 MASP1P48740 699 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 HERVK_113P63132 956 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 RCAN2Q14206 197 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 AMHR2Q16671 573 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms