RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SPINT3P49223 89 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 LIMK2P53671 638 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 AP1B1Q10567 949 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 NFATC2Q13469 925 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 NR1D2Q14995 579 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 PCSK7Q16549 785 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 ASTE1Q2TB18 679 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-215ENST00000485550 NLRP8Q86W28 1048 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 ATCAYQ86WG3 371 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 CACNA2D3Q8IZS8 1091 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 PLD5Q8N7P1 536 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 CCHCR1Q8TD31 782 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-215ENST00000485550 SLC37A2Q8TED4 501 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 FATE1Q969F0 183 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 HDAC11Q96DB2 347 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 ABHD17AQ96GS6 310 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 AHCYL2Q96HN2 611 aaKnown RBP10.47□□□□□ -0.73
HMGN1-215ENST00000485550 ZNF830Q96NB3 372 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-215ENST00000485550 AGAP3Q96P47 875 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 TAAR9Q96RI9 348 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 SLC38A3Q99624 504 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 CHP1Q99653 195 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 MAK16Q9BXY0 300 aaKnown RBP10.47□□□□□ -0.73
HMGN1-215ENST00000485550 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 IGSF5Q9NSI5 407 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 SPTLC3Q9NUV7 552 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 HAUS2Q9NVX0 235 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 ZNHIT6Q9NWK9 470 aaKnown RBP10.47□□□□□ -0.73
HMGN1-215ENST00000485550 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 SHOC2Q9UQ13 582 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 HYOU1Q9Y4L1 999 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 B3GALT1Q9Y5Z6 326 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 CRYBG3Q68DQ2 2970 aa10.47□□□□□ -0.73
HMGN1-215ENST00000485550 PRR19A6NJB7 356 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 HGSO14964 777 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-215ENST00000485550 PYGLP06737 847 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 CSF2RBP32927 897 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 CSTF2P33240 577 aaKnown RBP eCLIP10.46□□□□□ -0.73
HMGN1-215ENST00000485550 MAPK9P45984 424 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 CD97P48960 835 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 RPL26P61254 145 aaKnown RBP10.46□□□□□ -0.73
HMGN1-215ENST00000485550 DYNLT1P63172 113 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 PEX6Q13608 980 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 LLGL1Q15334 1064 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 LACTB2Q53H82 288 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-215ENST00000485550 ALS2CLQ60I27 953 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 TMEM71Q6P5X7 295 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 FAM129CQ86XR2 697 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 RFX6Q8HWS3 928 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 OR4D9Q8NGE8 314 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 NCSTNQ92542 709 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 ART4Q93070 314 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 EID2BQ96D98 161 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 CATSPER2Q96P56 530 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 LYSMD1Q96S90 227 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 DNAJC7Q99615 494 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 SPATA16Q9BXB7 569 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 B3GNT4Q9C0J1 378 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 BRD8Q9H0E9 1235 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 TBC1D29Q9UFV1 150 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 KLHL3Q9UH77 587 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 DNPEPQ9ULA0 475 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 RPL26L1Q9UNX3 145 aaKnown RBP10.46□□□□□ -0.73
HMGN1-215ENST00000485550 SRPK3Q9UPE1 567 aa10.46□□□□□ -0.73
HMGN1-215ENST00000485550 SSU72P8A0A1W2PR75 194 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 A1L4Q6 167 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 C3orf70A6NLC5 250 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 EFCAB7A8K855 629 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 APOL1O14791 398 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 RAD1O60671 282 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 KRT1P04264 644 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 THRAP10827 490 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 ZNF8P17098 575 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 OAS2P29728 719 aaKnown RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 MAN1A1P33908 653 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 IFI35P80217 286 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 HHEXQ03014 270 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 PPIDQ08752 370 aaKnown RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 CDC20Q12834 499 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 KLRB1Q12918 225 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 LRP8Q14114 963 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 DEFB109BQ30KR1 87 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 HENMT1Q5T8I9 393 aaKnown RBP10.45□□□□□ -0.74
HMGN1-215ENST00000485550 ATP1A1-AS1Q5TC04 95 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 SLC9A4Q6AI14 798 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 IYDQ6PHW0 289 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 NT5DC3Q86UY8 548 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 SFRP1Q8N474 314 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 AGBL5Q8NDL9 886 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 GPR26Q8NDV2 337 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 SPATA22Q8NHS9 363 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 CCDC42Q96M95 316 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 ADGRE3Q9BY15 652 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 OR2AG1Q9H205 316 aa10.45□□□□□ -0.74
HMGN1-215ENST00000485550 NHEJ1Q9H9Q4 299 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms