RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 XAB2Q9HCS7 855 aaKnown RBP11.75□□□□□ -0.53
APTX-227ENST00000485479 TREX1Q9NSU2 369 aa11.75□□□□□ -0.53
APTX-227ENST00000485479 SAMD15Q9P1V8 674 aa11.75□□□□□ -0.53
APTX-227ENST00000485479 SLC17A6Q9P2U8 582 aa11.75□□□□□ -0.53
APTX-227ENST00000485479 NFKBIL1Q9UBC1 381 aaPredicted RBP11.75□□□□□ -0.53
APTX-227ENST00000485479 KCNK6Q9Y257 313 aa11.75□□□□□ -0.53
APTX-227ENST00000485479 SLC17A4Q9Y2C5 497 aa11.75□□□□□ -0.53
APTX-227ENST00000485479 UTP11Q9Y3A2 253 aaKnown RBP11.75□□□□□ -0.53
APTX-227ENST00000485479 ARHGEF17Q96PE2 2063 aaPredicted RBP11.75□□□□□ -0.53
APTX-227ENST00000485479 GOLGA4Q13439 2230 aaKnown RBP11.75□□□□□ -0.53
APTX-227ENST00000485479 ZFC3H1O60293 1989 aaKnown RBP11.74□□□□□ -0.53
APTX-227ENST00000485479 SPTBN4Q9H254 2564 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 TRIM38O00635 465 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 AQP9O43315 295 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PIAS1O75925 651 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CDK14O94921 469 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 GIMD1P0DJR0 217 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 ITGALP20701 1170 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 FOXN2P32314 431 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 ELK3P41970 407 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 NPY2RP49146 381 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 HNRNPKP61978 463 aaKnown RBP eCLIP11.74□□□□□ -0.53
APTX-227ENST00000485479 PDE1BQ01064 536 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 ITGA9Q13797 1035 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 MORF4L2Q15014 288 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 SEPT7Q16181 437 aaKnown RBP11.74□□□□□ -0.53
APTX-227ENST00000485479 SKIDA1Q1XH10 827 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 SERPINA9Q86WD7 417 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 DCP2Q8IU60 420 aaKnown RBP11.74□□□□□ -0.53
APTX-227ENST00000485479 TRAPPC5Q8IUR0 188 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 ZNF547Q8IVP9 402 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 NAXDQ8IW45 347 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CLDN19Q8N6F1 224 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 OTUD6BQ8N6M0 293 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
APTX-227ENST00000485479 RASGEF1AQ8N9B8 481 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 FBXO25Q8TCJ0 367 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PATE1Q8WXA2 126 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CFAP36Q96G28 342 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 KCTD5Q9NXV2 234 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 APPL1Q9UKG1 709 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 SOX13Q9UN79 622 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 RPS6KL1Q9Y6S9 549 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 SDR42E2A6NKP2 422 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PPFIA2O75334 1257 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 TNFP01375 233 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 KELP23276 732 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 RXRGP48443 463 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CTBSQ01459 385 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 TMEM115Q12893 351 aaPredicted RBP11.74□□□□□ -0.53
APTX-227ENST00000485479 DNAJC3Q13217 504 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 DBN1Q16643 649 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 HIF1AQ16665 826 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PYCR3Q53H96 274 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 ZDHHC24Q6UX98 284 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 NAPRTQ6XQN6 538 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 KANSL1Q7Z3B3 1105 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 SNX20Q7Z614 316 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 TAF8Q7Z7C8 310 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PCGF5Q86SE9 256 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 HOOK3Q86VS8 718 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 NLRP8Q86W28 1048 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CCDC25Q86WR0 208 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 MNS1Q8NEH6 495 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 FAM174AQ8TBP5 190 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 NETO1Q8TDF5 533 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 RHBDD1Q8TEB9 315 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 TTC25Q96NG3 672 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 VPS35Q96QK1 796 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 KIFC1Q9BW19 673 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CDH19Q9H159 772 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PLAC1Q9HBJ0 212 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 EPB41L5Q9HCM4 733 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 TRIM39Q9HCM9 518 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 RAD18Q9NS91 495 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 PRSS21Q9Y6M0 314 aa11.74□□□□□ -0.53
APTX-227ENST00000485479 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
APTX-227ENST00000485479 SPTBN2O15020 2390 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 CELSR3Q9NYQ7 3312 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 TRBV23OR9-2A0A075B6M9 112 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 H3BM21 787 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 YY2O15391 372 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 EML2O95834 649 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 ACRV1P26436 265 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 TEAD1P28347 426 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
APTX-227ENST00000485479 CALCOCO2Q13137 446 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 NRROSQ86YC3 692 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 NXPE1Q8N323 547 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 MMGT1Q8N4V1 131 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 LILRA3Q8N6C8 439 aaPredicted RBP11.73□□□□□ -0.53
APTX-227ENST00000485479 DDHD1Q8NEL9 900 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 OR4L1Q8NH43 312 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 STAMBPL1Q96FJ0 436 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 OR2M4Q96R27 311 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms