RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 NKD1Q969G9 470 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 ZSCAN5AQ9BUG6 496 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 SLC12A9Q9BXP2 914 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 CARD9Q9H257 536 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 DDX56Q9NY93 547 aaKnown RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 OAS3Q9Y6K5 1087 aaKnown RBP13.11□□□□□ -0.31
UBA3-210ENST00000485424 MED13Q9UHV7 2174 aa13.11□□□□□ -0.31
UBA3-210ENST00000485424 NBPF19A0A087WUL8 3843 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 KIR2DS5A0A0G2JLQ3 304 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 A0A0G2JNG1 304 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 FADS2P1A8MWK0 482 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 KIR2DS3K7RE56 304 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 SPOPO43791 374 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 MMP2P08253 660 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 F3P13726 295 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 ZBTB17Q13105 803 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 SQSTM1Q13501 440 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 KIR2DS5Q14953 304 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 VSIG1Q86XK7 387 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 SRPK1Q96SB4 655 aaKnown RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 DNAJC7Q99615 494 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 DDA1Q9BW61 102 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 BRD8Q9H0E9 1235 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 SARS2Q9NP81 518 aaKnown RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 GEMIN8Q9NWZ8 242 aaKnown RBP13.1□□□□□ -0.31
UBA3-210ENST00000485424 TMEM9Q9P0T7 183 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 TBC1D29Q9UFV1 150 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 SHOC2Q9UQ13 582 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 PCDHGA3Q9Y5H0 932 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 B3GALT1Q9Y5Z6 326 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 CCDC88CQ9P219 2028 aa13.1□□□□□ -0.31
UBA3-210ENST00000485424 ICE1Q9Y2F5 2266 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
UBA3-210ENST00000485424 GPR89AB7ZAQ6 455 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 NUAK1O60285 661 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 PIRTP0C851 137 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 GPR89BP0CG08 455 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 LIFP15018 202 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 UGT1A3P35503 534 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 SLC1A1P43005 524 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 EPHA4P54764 986 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 CDK18Q07002 472 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 IHHQ14623 411 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 PLA2G4EQ3MJ16 856 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 PDPK2PQ6A1A2 396 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 IYDQ6PHW0 289 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 WDR74Q6RFH5 385 aaPredicted RBP13.09□□□□□ -0.31
UBA3-210ENST00000485424 CRTC3Q6UUV7 619 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 NPNTQ6UXI9 565 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 IMP4Q96G21 291 aaKnown RBP13.09□□□□□ -0.31
UBA3-210ENST00000485424 WDR24Q96S15 920 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 SLC25A51Q9H1U9 297 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 OR2AG1Q9H205 316 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 EPB41L1Q9H4G0 881 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 NHEJ1Q9H9Q4 299 aaPredicted RBP13.09□□□□□ -0.31
UBA3-210ENST00000485424 MAGEE1Q9HCI5 957 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 TRIM39Q9HCM9 518 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 ARFGAP3Q9NP61 516 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 KLC4Q9NSK0 619 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 OCIAD1Q9NX40 245 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 ATXN10Q9UBB4 475 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 PIKFYVEQ9Y2I7 2098 aa13.09□□□□□ -0.31
UBA3-210ENST00000485424 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 B4E171 279 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 KMOO15229 486 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 VIPP01282 170 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 SPTBP11277 2137 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 ZNF8P17098 575 aaPredicted RBP13.08□□□□□ -0.32
UBA3-210ENST00000485424 AMD1P17707 334 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 VCLP18206 1134 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 TSPAN7P41732 249 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 DCDC1P59894 354 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 TLE1Q04724 770 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 TFDP2Q14188 446 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 ASTE1Q2TB18 679 aaPredicted RBP13.08□□□□□ -0.32
UBA3-210ENST00000485424 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.08□□□□□ -0.32
UBA3-210ENST00000485424 KAZNQ674X7 775 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 ANKS6Q68DC2 871 aa13.08□□□□□ -0.32
UBA3-210ENST00000485424 BORAQ6PGQ7 559 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms