RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 OXR1Q8N573 874 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 EID2Q8N6I1 236 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 TMEM145Q8NBT3 493 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 PHC3Q8NDX5 983 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 CELF6Q96J87 481 aaKnown RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 FEM1CQ96JP0 617 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 PWWP2AQ96N64 755 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 KLHL32Q96NJ5 620 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 KCTD15Q96SI1 283 aaPredicted RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 SNRNP25Q9BV90 132 aaKnown RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 TSSK1BQ9BXA7 367 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 EPB41L1Q9H4G0 881 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 VPS37BQ9H9H4 285 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 MRPL47Q9HD33 250 aaKnown RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 CIDEBQ9UHD4 219 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 PTPRBP23467 1997 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 GOLGA4Q13439 2230 aaKnown RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 SMIM31A0A1B0GVY4 71 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 LIASO43766 372 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 IGSF6O95976 241 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 PABPC4LP0CB38 370 aaKnown RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 DHRS4L1P0CG22 281 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 PGM1P36871 562 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 RXRGP48443 463 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 VPS41P49754 854 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 RAD51Q06609 339 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 LSAMPQ13449 338 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 CNPY1Q3B7I2 92 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 TMEM259Q4ZIN3 620 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 INO80DQ53TQ3 878 aaPredicted RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 TMCO4Q5TGY1 634 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 KIAA1161Q6NSJ0 714 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 DNAJC14Q6Y2X3 702 aaPredicted RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 ACAD11Q709F0 780 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 RCOR2Q8IZ40 523 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 BANPQ8N9N5 519 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 FNIP1Q8TF40 1166 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 EXOC2Q96KP1 924 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 NDNQ99608 321 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 ECSITQ9BQ95 431 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 HERPUD2Q9BSE4 406 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 TMEM121BQ9BXQ6 578 aaPredicted RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 CALN1Q9BXU9 219 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 MAK16Q9BXY0 300 aaKnown RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 SLC17A9Q9BYT1 436 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 FRMD8P1Q9BZ68 369 aaPredicted RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 PCDH9Q9HC56 1237 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 NDE1Q9NXR1 346 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 UBA2Q9UBT2 640 aaPredicted RBP10.72□□□□□ -0.69
DDX56-212ENST00000485367 ITM2BQ9Y287 266 aa10.72□□□□□ -0.69
DDX56-212ENST00000485367 FAM221BA6H8Z2 402 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 IGLON5A6NGN9 336 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 J3KR12 359 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 INSIG1O15503 277 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 TSPAN6O43657 245 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 AP1G1O43747 822 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 SDC3O75056 442 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 LRCH4O75427 683 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 FAM155BO75949 473 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 KRT37O76014 449 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 LDOC1O95751 146 aaPredicted RBP10.71□□□□□ -0.69
DDX56-212ENST00000485367 PAK4O96013 591 aaPredicted RBP10.71□□□□□ -0.69
DDX56-212ENST00000485367 ANPEPP15144 967 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 NDST2P52849 883 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 ACTR3P61158 418 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 SGCGQ13326 291 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 ITGA9Q13797 1035 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 MAP7Q14244 749 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 FGL2Q14314 439 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 CYTH1Q15438 398 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 LRRC73Q5JTD7 316 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 RNASEH2BQ5TBB1 312 aaKnown RBP10.71□□□□□ -0.69
DDX56-212ENST00000485367 LRRC38Q5VT99 294 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 KYAT3Q6YP21 454 aaKnown RBP10.71□□□□□ -0.69
DDX56-212ENST00000485367 RFX8Q6ZV50 586 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 MARK2Q7KZI7 788 aaKnown RBP10.71□□□□□ -0.69
DDX56-212ENST00000485367 TTC7BQ86TV6 843 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 OR13H1Q8NG92 308 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 RAB7BQ96AH8 199 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 CNDP2Q96KP4 475 aaKnown RBP10.71□□□□□ -0.69
DDX56-212ENST00000485367 TMEM120AQ9BXJ8 343 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 SLC39A8Q9C0K1 460 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 C1orf21Q9H246 121 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 ACSS3Q9H6R3 686 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 KCNK4Q9NYG8 393 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 LHX3Q9UBR4 397 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 WDR37Q9Y2I8 494 aa10.71□□□□□ -0.69
DDX56-212ENST00000485367 ARID1BQ8NFD5 2236 aaPredicted RBP10.71□□□□□ -0.7
DDX56-212ENST00000485367 PLXNB3Q9ULL4 1909 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 A0A0G2JND7 137 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 ARHGAP42A6NI28 874 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 RAD51BO15315 384 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 PRAMEF11O60813 436 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 TM7SF2O76062 418 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 ERCC2P18074 760 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 ADRA1DP25100 572 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 SERPINB3P29508 390 aa10.7□□□□□ -0.7
DDX56-212ENST00000485367 THOC5Q13769 683 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms