RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ZNF843Q8N446 348 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 RCBTB1Q8NDN9 531 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 SGF29Q96ES7 293 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 FCRL5Q96RD9 977 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 TIMM29Q9BSF4 260 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 ASPSCR1Q9BZE9 553 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 OR2AG1Q9H205 316 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 HACD3Q9P035 362 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 KCNK6Q9Y257 313 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 PRKAB1Q9Y478 270 aa19.61■□□□□ 0.73
HPS4-213ENST00000483631 ZNF462Q96JM2 2506 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 LILRA5A6NI73 299 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 STMND1H3BQB6 276 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 KMOO15229 486 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 PMPCBO75439 489 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 ITGB2P05107 769 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 PIRTP0C851 137 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 FGF3P11487 239 aaPredicted RBP19.6■□□□□ 0.73
HPS4-213ENST00000483631 CCL4P13236 92 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 PECAM1P16284 738 aaPredicted RBP19.6■□□□□ 0.73
HPS4-213ENST00000483631 BPIP17213 487 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 CD68P34810 354 aaPredicted RBP19.6■□□□□ 0.73
HPS4-213ENST00000483631 TNNT3P45378 269 aaPredicted RBP19.6■□□□□ 0.73
HPS4-213ENST00000483631 RAB15P59190 212 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 XRCC4Q13426 336 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 TGIF1Q15583 401 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 MANEAQ5SRI9 462 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 KDELC2Q7Z4H8 507 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 ADGRG6Q86SQ4 1221 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 TEFMQ96QE5 360 aaKnown RBP19.6■□□□□ 0.73
HPS4-213ENST00000483631 SAE1Q9UBE0 346 aaPredicted RBP19.6■□□□□ 0.73
HPS4-213ENST00000483631 TRHDEQ9UKU6 1024 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 EFR3BQ9Y2G0 817 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 PCDHA13Q9Y5I0 950 aa19.6■□□□□ 0.73
HPS4-213ENST00000483631 PPFIA2O75334 1257 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 XRCC1P18887 633 aaPredicted RBP19.59■□□□□ 0.73
HPS4-213ENST00000483631 WNT3AP56704 352 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 COPS2P61201 443 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 MPP3Q13368 585 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 ALS2CLQ60I27 953 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 KAZNQ674X7 775 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 KDELC1Q6UW63 502 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 BBS12Q6ZW61 710 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 ARHGAP22Q7Z5H3 698 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 LRRTM4Q86VH4 590 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 ZFAND4Q86XD8 727 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 ZSCAN1Q8NBB4 408 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 BRSK1Q8TDC3 778 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 HTR3CQ8WXA8 447 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 MED8Q96G25 268 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 QKIQ96PU8 341 aaKnown RBP eCLIP19.59■□□□□ 0.73
HPS4-213ENST00000483631 KLHL8Q9P2G9 620 aaPredicted RBP19.59■□□□□ 0.73
HPS4-213ENST00000483631 CPNE7Q9UBL6 633 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 PIEZO2Q9H5I5 2752 aa19.59■□□□□ 0.73
HPS4-213ENST00000483631 TRBV23OR9-2A0A075B6M9 112 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 PRR19A6NJB7 356 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 APOC4-APOC2K7ER74 178 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 KCNJ13O60928 360 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 APOC2P02655 101 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 NFKB1P19838 968 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 HLA-DPA1P20036 260 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 ATP1A2P50993 1020 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 UBE2IP63279 158 aaKnown RBP19.58■□□□□ 0.72
HPS4-213ENST00000483631 ADCY2Q08462 1091 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 WASH2PQ6VEQ5 465 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 PANX2Q96RD6 677 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 ZMYND15Q9H091 742 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 WASH6PQ9NQA3 447 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 KLC4Q9NSK0 619 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 SPO11Q9Y5K1 396 aa19.58■□□□□ 0.72
HPS4-213ENST00000483631 SNX2O60749 519 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 CDK14O94921 469 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 ZNF7P17097 686 aaPredicted RBP19.57■□□□□ 0.72
HPS4-213ENST00000483631 FECHP22830 423 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 INSCQ1MX18 579 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 DCAF12Q5T6F0 453 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 AGAP9Q5VTM2 703 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 KIAA1614Q5VZ46 1190 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 B4GALNT4Q76KP1 1039 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 PID1Q7Z2X4 250 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 ZC3H18Q86VM9 953 aaKnown RBP19.57■□□□□ 0.72
HPS4-213ENST00000483631 ZNF761Q86XN6 746 aaPredicted RBP19.57■□□□□ 0.72
HPS4-213ENST00000483631 CCDC50Q8IVM0 306 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 ZNF567Q8N184 647 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 TTC30BQ8N4P2 665 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 BMPERQ8N8U9 685 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 MRGPRX2Q96LB1 330 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 FERMT1Q9BQL6 677 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 ZPBPQ9BS86 351 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 PRDM8Q9NQV8 689 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 SLC39A1Q9NY26 324 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 UBP1Q9NZI7 540 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 TMEM9Q9P0T7 183 aa19.57■□□□□ 0.72
HPS4-213ENST00000483631 MN1Q10571 1320 aaPredicted RBP19.56■□□□□ 0.72
HPS4-213ENST00000483631 AURKAO14965 403 aa19.56■□□□□ 0.72
HPS4-213ENST00000483631 ZNF189O75820 626 aaPredicted RBP19.56■□□□□ 0.72
HPS4-213ENST00000483631 SLC4A1P02730 911 aa19.56■□□□□ 0.72
HPS4-213ENST00000483631 ANKRD34CP0C6C1 535 aa19.56■□□□□ 0.72
HPS4-213ENST00000483631 VCLP18206 1134 aa19.56■□□□□ 0.72
HPS4-213ENST00000483631 CTNNA1P35221 906 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms