RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 NAT6Q93015 286 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 CCDC74AQ96AQ1 378 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 RMI1Q9H9A7 625 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 KCNK6Q9Y257 313 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
SSR1-208ENST00000483409 CTAGE9A4FU28 777 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 CASC3O15234 703 aaKnown RBP13.23□□□□□ -0.29
SSR1-208ENST00000483409 FANCGO15287 622 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 VEGFDO43915 354 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 OPA1O60313 960 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 CDK14O94921 469 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 KRT14P02533 472 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 GP1BAP07359 652 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 CDK4P11802 303 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 AKT1P31749 480 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 HADHAP40939 763 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 MAZP56270 477 aaKnown RBP13.23□□□□□ -0.29
SSR1-208ENST00000483409 XIAPP98170 497 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 E2F1Q01094 437 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 TMEM115Q12893 351 aaPredicted RBP13.23□□□□□ -0.29
SSR1-208ENST00000483409 GPS1Q13098 491 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 NFATC2Q13469 925 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 PEX6Q13608 980 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 KIF26BQ2KJY2 2108 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 C14orf28Q4W4Y0 310 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 LDLRAP1Q5SW96 308 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 PAPD7Q5XG87 772 aaKnown RBP13.23□□□□□ -0.29
SSR1-208ENST00000483409 OGFOD3Q6PK18 319 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 LRRTM4Q86VH4 590 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 TRAPPC5Q8IUR0 188 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 GALNT15Q8N3T1 639 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 DDHD1Q8NEL9 900 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 DTX3LQ8TDB6 740 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 CCDC3Q9BQI4 270 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 FAM96AQ9H5X1 160 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 ASB8Q9H765 288 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 CASS4Q9NQ75 786 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 EIF2B3Q9NR50 452 aaKnown RBP13.23□□□□□ -0.29
SSR1-208ENST00000483409 SMOXQ9NWM0 555 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 RABGEF1Q9UJ41 708 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 APPL1Q9UKG1 709 aa13.23□□□□□ -0.29
SSR1-208ENST00000483409 TCRBV7S3A2A0A539 114 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 MROH6A6NGR9 719 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 GPR89AB7ZAQ6 455 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 CHUKO15111 745 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 SNX2O60749 519 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 ECEL1O95672 775 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 EML2O95834 649 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 GPR89BP0CG08 455 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 JUPP14923 745 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 MC4RP32245 332 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 SESN2P58004 480 aaPredicted RBP13.22□□□□□ -0.29
SSR1-208ENST00000483409 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.29
SSR1-208ENST00000483409 INSCQ1MX18 579 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 CCNI2Q6ZMN8 369 aaPredicted RBP13.22□□□□□ -0.29
SSR1-208ENST00000483409 TMPRSS12Q86WS5 348 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 NAGSQ8N159 534 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 RASGEF1AQ8N9B8 481 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 STYXQ8WUJ0 223 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 NAT14Q8WUY8 206 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 TTC25Q96NG3 672 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 ZCCHC2Q9C0B9 1178 aaKnown RBP13.22□□□□□ -0.29
SSR1-208ENST00000483409 DDX47Q9H0S4 455 aaKnown RBP13.22□□□□□ -0.29
SSR1-208ENST00000483409 ABCG4Q9H172 646 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 OSGEPL1Q9H4B0 414 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 SYNDIG1Q9H7V2 258 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 KLC4Q9NSK0 619 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 NLE1Q9NVX2 485 aaPredicted RBP13.22□□□□□ -0.29
SSR1-208ENST00000483409 SLC23A2Q9UGH3 650 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 CRLS1Q9UJA2 301 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 DNAJC16Q9Y2G8 782 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 MSRB2Q9Y3D2 182 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 SAR1BQ9Y6B6 198 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 SLC30A1Q9Y6M5 507 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 RNF215Q9Y6U7 377 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 AKAP13Q12802 2813 aa13.22□□□□□ -0.29
SSR1-208ENST00000483409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.21□□□□□ -0.29
SSR1-208ENST00000483409 TRBV23OR9-2A0A075B6M9 112 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 HEATR9A2RTY3 570 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 OR2AG2A6NM03 316 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 KMOO15229 486 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 PRSS56P0CW18 603 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 GLB1P16278 677 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 ZNF7P17097 686 aaPredicted RBP13.21□□□□□ -0.29
SSR1-208ENST00000483409 MSH3P20585 1137 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 ITGALP20701 1170 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 FNTAP49354 379 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 CDKN1CP49918 316 aaPredicted RBP13.21□□□□□ -0.29
SSR1-208ENST00000483409 ARSDP51689 593 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 CTSCP53634 463 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 ZRANB3Q5FWF4 1079 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 DET1Q7L5Y6 550 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 SNX20Q7Z614 316 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 ZNF547Q8IVP9 402 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 Q8N9G6 341 aaPredicted RBP13.21□□□□□ -0.29
SSR1-208ENST00000483409 ULK4Q96C45 1275 aa13.21□□□□□ -0.29
SSR1-208ENST00000483409 CCDC97Q96F63 343 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms