RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CERCAMQ5T4B2 595 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 CRTC3Q6UUV7 619 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 LRRTM4Q86VH4 590 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 SFTPA2Q8IWL1 248 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 CACTIN-AS1Q8N1I8 211 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 OR13C4Q8NGS5 318 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 SYNDIG1Q9H7V2 258 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 KCNK6Q9Y257 313 aa18.16■□□□□ 0.5
SMIM4-204ENST00000482728 IGF2RP11717 2491 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 GOLGA6L10A0A0M3HER8 536 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 TRABD2BA6NFA1 517 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 RHPN2P1A8MT19 583 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 C1QTNF9BB2RNN3 333 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 CHUKO15111 745 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 ZW10O43264 779 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 NUDT21O43809 227 aaKnown RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 SNX2O60749 519 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 C1QTNF9P0C862 333 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 MSH3P20585 1137 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 ZNF140P52738 457 aaPredicted RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 BASP1P80723 227 aaKnown RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 LAMB3Q13751 1172 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 HLTFQ14527 1009 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 INSCQ1MX18 579 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 SKIDA1Q1XH10 827 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 KHDC1Q4VXA5 237 aaKnown RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 GPRC6AQ5T6X5 926 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 TRAPPC5Q8IUR0 188 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 ARL14Q8N4G2 192 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 DCBLD1Q8N8Z6 715 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 Q8N9G6 341 aaPredicted RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 ACTRT1Q8TDG2 376 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 GATA6Q92908 595 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 DEPDC7Q96QD5 511 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 KLC4Q9NSK0 619 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 PCYT1BQ9Y5K3 369 aaPredicted RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 SLC30A1Q9Y6M5 507 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 RNF215Q9Y6U7 377 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 MAP1BP46821 2468 aaKnown RBP18.15■□□□□ 0.5
SMIM4-204ENST00000482728 PLXNB3Q9ULL4 1909 aa18.15■□□□□ 0.5
SMIM4-204ENST00000482728 AKAP13Q12802 2813 aa18.14■□□□□ 0.5
SMIM4-204ENST00000482728 SCN8AQ9UQD0 1980 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 TRBV23OR9-2A0A075B6M9 112 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 CES2O00748 559 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 GAPDHSO14556 408 aaPredicted RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 PNLIPP16233 465 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 ZNF7P17097 686 aaPredicted RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 TCP1P17987 556 aaKnown RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 VCLP18206 1134 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 ITGALP20701 1170 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 AKT1P31749 480 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 MAZP56270 477 aaKnown RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 NFATC2Q13469 925 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 SPIDRQ14159 915 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 CDCP2Q5VXM1 449 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 RBM44Q6ZP01 1051 aaKnown RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 NAGSQ8N159 534 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 DDHD1Q8NEL9 900 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 STYXQ8WUJ0 223 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 ULK4Q96C45 1275 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 DCUN1D1Q96GG9 259 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 DNAJC1Q96KC8 554 aaKnown RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 OSGEPL1Q9H4B0 414 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 NLE1Q9NVX2 485 aaPredicted RBP18.14■□□□□ 0.49
SMIM4-204ENST00000482728 SMOXQ9NWM0 555 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 CRLS1Q9UJA2 301 aa18.14■□□□□ 0.49
SMIM4-204ENST00000482728 SPEGQ15772 3267 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 ZFC3H1O60293 1989 aaKnown RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 CCL22O00626 93 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 GPR39O43194 453 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 CSO75390 466 aaKnown RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 TCEA3O75764 348 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 RALBP11234 206 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 SLC2A4P14672 509 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 ALDH4A1P30038 563 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 COILP38432 576 aaPredicted RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 GRIA1P42261 906 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 CCL7P80098 99 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 XIAPP98170 497 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 TRIP13Q15645 432 aaPredicted RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 GPR33Q49SQ1 333 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 CCDC38Q502W7 563 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 SNX20Q7Z614 316 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 C17orf82Q86X59 251 aaPredicted RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 CCNJLQ8IV13 435 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 RASGEF1AQ8N9B8 481 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 PATE1Q8WXA2 126 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 ZNF514Q96K75 400 aaPredicted RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 GFM1Q96RP9 751 aaKnown RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 LRRN3Q9H3W5 708 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 FAM96AQ9H5X1 160 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 CASS4Q9NQ75 786 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 EIF2B3Q9NR50 452 aaKnown RBP18.13■□□□□ 0.49
SMIM4-204ENST00000482728 SMARCAL1Q9NZC9 954 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 TBC1D29Q9UFV1 150 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 RABGEF1Q9UJ41 708 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 DNAJC16Q9Y2G8 782 aa18.13■□□□□ 0.49
SMIM4-204ENST00000482728 EPG5Q9HCE0 2579 aa18.12■□□□□ 0.49
SMIM4-204ENST00000482728 MYLKQ15746 1914 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms