RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 MTBPQ96DY7 904 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 BBS4Q96RK4 519 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 MMTAG2Q9BU76 263 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 MSTO1Q9BUK6 570 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 HEMGNQ9BXL5 484 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 IL25Q9H293 177 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 DDX31Q9H8H2 851 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 CLK4Q9HAZ1 481 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 FBRSL1Q9HCM7 1045 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 SPATS2LQ9NUQ6 558 aaKnown RBP3.77□□□□□ -1.81
GTF3A-207ENST00000482655 NKIRAS2Q9NYR9 191 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 DLGAP2Q9P1A6 1054 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 MALT1Q9UDY8 824 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 KCNG2Q9UJ96 466 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 MTMR6Q9Y217 621 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 CARD8Q9Y2G2 431 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 PIK3C2AO00443 1686 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 TRPM1Q7Z4N2 1603 aa3.77□□□□□ -1.81
GTF3A-207ENST00000482655 NSD2O96028 1365 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 LY75O60449 1722 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 IGLV5-37A0A075B6J1 123 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 A0A0U1RQJ8 604 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 A0A1W2PRG0 241 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 TIMM23O14925 209 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 LDLRAD4O15165 306 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 TGFB1I1O43294 461 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 BUB3O43684 328 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 AHCYL1O43865 530 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 MTA2O94776 668 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 HEXAP06865 529 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 HOXB5P09067 269 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ICAM3P32942 547 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ACTN2P35609 894 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 PBX3P40426 434 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 NLRP5P59047 1200 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SLC18A2Q05940 514 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 GRSF1Q12849 480 aaKnown RBP eCLIP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 EPS8Q12929 822 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 CSTF3Q12996 717 aaKnown RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 AIMP2Q13155 320 aaKnown RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 MYBPHQ13203 477 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SNTA1Q13424 505 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ZNF672Q499Z4 452 aaPredicted RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 PLEKHO1Q53GL0 409 aaPredicted RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 XKR9Q5GH70 373 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 FAM76BQ5HYJ3 339 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ZNF280DQ6N043 979 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 TSSK4Q6SA08 328 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SMIM5Q71RC9 77 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 TICAM1Q8IUC6 712 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 LURAP1LQ8IV03 231 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ARHGAP12Q8IWW6 846 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 MB21D2Q8IYB1 491 aaPredicted RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 KIAA2013Q8IYS2 634 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 C17orf53Q8N3J3 647 aaPredicted RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 NEXN-AS1Q8NBZ9 246 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 MCPH1Q8NEM0 835 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 TRIB2Q92519 343 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 NR4A3Q92570 626 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ZC3HAV1LQ96H79 300 aaKnown RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 CCDC34Q96HJ3 373 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 CMTM3Q96MX0 182 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SIN3AQ96ST3 1273 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 STRA6Q9BX79 667 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 NUF2Q9BZD4 464 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 MDFICQ9P1T7 246 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SLCO3A1Q9UIG8 710 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 RPS6KA6Q9UK32 745 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 MKLN1Q9UL63 735 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 AAR2Q9Y312 384 aaKnown RBP3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SNX8Q9Y5X2 465 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 NFS1Q9Y697 457 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 SESN1Q9Y6P5 492 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 ANKRD30BQ9BXX2 1392 aa3.76□□□□□ -1.81
GTF3A-207ENST00000482655 UTYO14607 1347 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 ACEP12821 1306 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 USP54Q70EL1 1684 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 SRRM3A6NNA2 597 aaPredicted RBP3.75□□□□□ -1.81
GTF3A-207ENST00000482655 EBAG9O00559 213 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 GRID2O43424 1007 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 PAGE4O60829 102 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 DDNO94850 711 aaPredicted RBP3.75□□□□□ -1.81
GTF3A-207ENST00000482655 SEC31AO94979 1220 aaKnown RBP3.75□□□□□ -1.81
GTF3A-207ENST00000482655 TFP02787 698 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 RARGP13631 454 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 PORP16435 677 aaPredicted RBP3.75□□□□□ -1.81
GTF3A-207ENST00000482655 SAT1P21673 171 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 HADHAP40939 763 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 CENPAP49450 140 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 CDH8P55286 799 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 HDAC4P56524 1084 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 DDR1Q08345 913 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 NIPAL4Q0D2K0 466 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 RNPS1Q15287 305 aaKnown RBP3.75□□□□□ -1.81
GTF3A-207ENST00000482655 ZSCAN23Q3MJ62 389 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 DUSP28Q4G0W2 176 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 PLEKHS1Q5SXH7 462 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 TXNDC8Q6A555 127 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 USP43Q70EL4 1123 aa3.75□□□□□ -1.81
GTF3A-207ENST00000482655 SZRD1Q7Z422 152 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms