RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DBN1Q16643 649 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PEAR1Q5VY43 1037 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 MACC1Q6ZN28 852 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 RAVER1Q8IY67 606 aaKnown RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 RBFAQ8N0V3 343 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 NXPE1Q8N323 547 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 CEP76Q8TAP6 659 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 GSDMBQ8TAX9 411 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 SKA1Q96BD8 255 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 ULK4Q96C45 1275 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 CERS2Q96G23 380 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 COX14Q96I36 57 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 NUSAP1Q9BXS6 441 aaKnown RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 FAM129AQ9BZQ8 928 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 TCEAL2Q9H3H9 227 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 CYP4F12Q9HCS2 524 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 FGF22Q9HCT0 170 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 ATXN10Q9UBB4 475 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 FAM8A1Q9UBU6 413 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 PNMA8BQ9ULN7 279 aaPredicted RBP13.1□□□□□ -0.31
HDAC1-208ENST00000482310 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
HDAC1-208ENST00000482310 UBA6A0AVT1 1052 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 PRSS38A1L453 326 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 KHNYNO15037 678 aaKnown RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 OR1I1O60431 355 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 MAGEC1O60732 1142 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 RASGRP1O95267 797 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 DPP6P42658 865 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 SLC1A2P43004 574 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ABCG1P45844 678 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ARCN1P48444 511 aaKnown RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 GPX6P59796 221 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 SRP54P61011 504 aaKnown RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 TUBB4BP68371 445 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 DNAH14Q0VDD8 3507 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 EIF2B5Q13144 721 aaKnown RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 CTBP1Q13363 440 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.317e-11■■■■□ 22.4
HDAC1-208ENST00000482310 KYNUQ16719 465 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ALG11Q2TAA5 492 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 STEAP4Q687X5 459 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 PDPK2PQ6A1A2 396 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 NEPROQ6NW34 567 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 RABEPKQ7Z6M1 372 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ADGRG6Q86SQ4 1221 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 NLRP8Q86W28 1048 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 DENND6AQ8IWF6 608 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 OR56A4Q8NGH8 313 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 OR1E3Q8WZA6 343 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 PEX13Q92968 403 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 MRRFQ96E11 262 aaKnown RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 DCUN1D1Q96GG9 259 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 PARD6BQ9BYG5 372 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 CARS2Q9HA77 564 aaKnown RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 IL21RQ9HBE5 538 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 FBXO6Q9NRD1 293 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ZNHIT2Q9UHR6 403 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 SLC6A14Q9UN76 642 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 GPSM3Q9Y4H4 160 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 PCDHGA5Q9Y5G8 931 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 PCYT1BQ9Y5K3 369 aaPredicted RBP13.09□□□□□ -0.31
HDAC1-208ENST00000482310 CACNA1AO00555 2505 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
HDAC1-208ENST00000482310 SPTY2D1-AS1A0A0U1RR47 76 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 NDUFS3O75489 264 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 JUNDP17535 347 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 ENGP17813 658 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 ITGB6P18564 788 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 KELP23276 732 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 PSMA3P25788 255 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 TEAD1P28347 426 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 TNFRSF8P28908 595 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 HOXD12P35452 270 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 ATXN3P54252 364 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-208ENST00000482310 EIF3BP55884 814 aaKnown RBP13.08□□□□□ -0.32
HDAC1-208ENST00000482310 TMEM115Q12893 351 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-208ENST00000482310 GPR33Q49SQ1 333 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 MRNIPQ6NTE8 343 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 SLC23A3Q6PIS1 610 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 CCNI2Q6ZMN8 369 aaPredicted RBP13.08□□□□□ -0.32
HDAC1-208ENST00000482310 CEP128Q6ZU80 1094 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 C3orf62Q6ZUJ4 267 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 IQCHQ86VS3 1027 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 PARGQ86W56 976 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 TRAPPC5Q8IUR0 188 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 CCNJLQ8IV13 435 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 PHACTR4Q8IZ21 702 aa13.08□□□□□ -0.32
HDAC1-208ENST00000482310 BEND7Q8N7W2 519 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms