RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 BUB1O43683 1085 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 NEBLO76041 1014 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 GFPT2O94808 682 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 IGSF6O95976 241 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 UGT2B4P06133 528 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ANXA6P08133 673 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ALPIP09923 528 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 CCDC172P0C7W6 258 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 TGM2P21980 687 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 HTR1BP28222 390 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 EPHB2P29323 1055 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 STAT5AP42229 794 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 NSFP46459 744 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 CSNK1DP48730 415 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 HDAC4P56524 1084 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 JAM2P57087 298 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 POLR2FP61218 127 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PPARDQ03181 441 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 EIF2B5Q13144 721 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 EIF3IQ13347 325 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ELOCQ15369 112 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 CDKN3Q16667 212 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 CDO1Q16878 200 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 C15orf59Q2T9L4 293 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PARP15Q460N3 678 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 TMEM52BQ4KMG9 183 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 C2CD6Q53TS8 623 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ZNF542PQ5EBM4 170 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PRR31Q5SQ13 230 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 FKBP15Q5T1M5 1219 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PPP1R2P3Q6NXS1 205 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 WDR59Q6PJI9 974 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 MACC1Q6ZN28 852 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 DNAAF5Q86Y56 855 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PHF13Q86YI8 300 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 UMODL1-AS1Q8N2C9 162 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 RYBPQ8N488 228 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ARL14Q8N4G2 192 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 EMC1Q8N766 993 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 RTL3Q8N8U3 475 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 C3orf20Q8ND61 904 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ATL2Q8NHH9 583 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 WDR36Q8NI36 951 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 GPT2Q8TD30 523 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 LMX1AQ8TE12 382 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 KCNE4Q8WWG9 221 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ZNF641Q96N77 438 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 KLHL32Q96NJ5 620 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 EIF3CQ99613 913 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 SELENOOQ9BVL4 669 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 NUP62CLQ9H1M0 184 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 GANQ9H2C0 597 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ASCL3Q9NQ33 180 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 SAMSN1Q9NSI8 373 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 CHMP5Q9NZZ3 219 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ADAM22Q9P0K1 906 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 APOBEC3BQ9UH17 382 aaKnown RBP6.5□□□□□ -1.37
LRCH3-216ENST00000481048 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PADI4Q9UM07 663 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PCDHB1Q9Y5F3 818 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 ENTPD2Q9Y5L3 495 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 PIEZO2Q9H5I5 2752 aa6.5□□□□□ -1.37
LRCH3-216ENST00000481048 NBASA2RRP1 2371 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 CCDC187A0A096LP49 1063 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 TSPAN11A1L157 253 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 CDRT15L2A8MXV6 281 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 FAM72CH0Y354 149 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 K7ENP7 123 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 NTN3O00634 580 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 YY2O15391 372 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 GCATO75600 419 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 TMCC1O94876 653 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 CHRNB2P17787 502 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 GPD1P21695 349 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 XPAP23025 273 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 RFC1P35251 1148 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 IGFALSP35858 605 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 ZNF135P52742 658 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 ZNF143P52747 638 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 HK3P52790 923 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 RHOAP61586 193 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 POLR2LP62875 67 aaKnown RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 CXADRP78310 365 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 CFHR1Q03591 330 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 NSUN2Q08J23 767 aaKnown RBP eCLIP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 PTP4A2Q12974 167 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 SERINC3Q13530 473 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 SPIDRQ14159 915 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 SYCP1Q15431 976 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 UGP2Q16851 508 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 DEFB133Q30KQ1 61 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 TAF1BQ53T94 588 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 FAXCQ5TGI0 409 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 FAM72AQ5TYM5 149 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 FAM72DQ6L9T8 149 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 GUSBP11Q6P575 273 aa6.49□□□□□ -1.37
LRCH3-216ENST00000481048 INO80CQ6PI98 192 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-216ENST00000481048 POMZP3Q6PJE2 187 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms