RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 KCTD14Q9BQ13 255 aaPredicted RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 DDX18Q9NVP1 670 aaKnown RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 CHD5Q8TDI0 1954 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 RNF103-CHMP3A0A140T963 221 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 COL6A1P12109 1028 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 CR2P20023 1033 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 LPOP22079 712 aaPredicted RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 HTR1EP28566 365 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 ZFP36L2P47974 494 aaKnown RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 ZNF157P51786 506 aaPredicted RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 PTPRNQ16849 979 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 CST9Q5W186 159 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 PROSER1Q86XN7 944 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 PCSK9Q8NBP7 692 aaKnown RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 GPR152Q8TDT2 470 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 ZNF382Q96SR6 550 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 HGH1Q9BTY7 390 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 YTHDF1Q9BYJ9 559 aaKnown RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 SUN2Q9UH99 717 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 TRMT6Q9UJA5 497 aaKnown RBP24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 ANAPC2Q9UJX6 822 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 IKZF3Q9UKT9 509 aa24.42■■□□□ 1.5
SYNGAP1-206ENST00000479510 CCDC154A6NI56 674 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 CDC7O00311 574 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 BTN3A1O00481 513 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 ACSL4O60488 711 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 TLR5O60602 858 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 SNAP91O60641 907 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 PCSK6P29122 969 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 RFC2P35250 354 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 POLR2JP52435 117 aaKnown RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 HPCAP84074 193 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 LIPEQ05469 1076 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 GPR17Q13304 367 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 CYP51A1Q16850 503 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 TTC33Q6PID6 262 aaPredicted RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 GPRIN3Q6ZVF9 776 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 DRAXINQ8NBI3 349 aaPredicted RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 FAM81AQ8TBF8 368 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 C2orf15Q8WU43 125 aaKnown RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 RMDN1Q96DB5 314 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 HSFX1Q9UBD0 423 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 ASPDHA6ND91 283 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 NPEPPSL1A6NEC2 478 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 ACOX3O15254 700 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 ENO2P09104 434 aaPredicted RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 CDK4P11802 303 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 CTGFP29279 349 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 ADARP55265 1226 aaKnown RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 OXCT1P55809 520 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 ZBED5Q49AG3 693 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 AARS2Q5JTZ9 985 aaKnown RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 IL31Q6EBC2 164 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 DPP10Q8N608 796 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 LEMD2Q8NC56 503 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 OSCP1Q8WVF1 389 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 LZICQ8WZA0 190 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 TDRD1Q9BXT4 1180 aaKnown RBP24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 TIMM22Q9Y584 194 aa24.41■■□□□ 1.5
SYNGAP1-206ENST00000479510 GBF1Q92538 1859 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 A0A0D9SEW6 157 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 A0A1B0GTL3 188 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 MTMR11A4FU01 709 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 TSPAN12O95859 305 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 CHRM3P20309 590 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 OXTRP30559 389 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 IL2P60568 153 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 GPSM1Q86YR5 675 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 FAM110BQ8TC76 370 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 KCNJ9Q92806 393 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 OCEL1Q9H607 264 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 TRMT13Q9NUP7 481 aaKnown RBP24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 ZNF639Q9UID6 485 aa24.4■■□□□ 1.5
SYNGAP1-206ENST00000479510 IFRD1O00458 451 aaPredicted RBP24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 INPP4BO15327 924 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 PRSS56P0CW18 603 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 TTKP33981 857 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 SLC11A2P49281 568 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 EMX2Q04743 252 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 DCTN2Q13561 401 aaKnown RBP24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 FAM171A1Q5VUB5 890 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 GPR141Q7Z602 305 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 MDGA1Q8NFP4 955 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 SCUBE2Q9NQ36 999 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 ZNF225Q9UK10 706 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 OAZ3Q9UMX2 235 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 BPTFQ12830 3046 aa24.39■■□□□ 1.5
SYNGAP1-206ENST00000479510 H3BNC9 293 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 CLDN11O75508 207 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 PRLP01236 227 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 RBBP7Q16576 425 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 DHRS4L2Q6PKH6 230 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 OR7D4Q8NG98 312 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 TMIGD2Q96BF3 282 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 CEP295NLQ96MC4 621 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 TTLL2Q9BWV7 592 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 ADGRE3Q9BY15 652 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 CCSER2Q9H7U1 834 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 HEBP1Q9NRV9 189 aa24.39■■□□□ 1.49
SYNGAP1-206ENST00000479510 DNMT3LQ9UJW3 386 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms