RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 GRIA4P48058 902 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 SLC7A2P52569 658 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ZNF135P52742 658 aaPredicted RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 DEFA1P59665 94 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 DEFA3P59666 94 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 RAD51Q06609 339 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TAF5Q15542 800 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 FXNQ16595 210 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TYSND1Q2T9J0 566 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TCEAL5Q5H9L2 206 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 BRMS1LQ5PSV4 323 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 DESI1Q6ICB0 168 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 R3HCC1LQ7Z5L2 792 aaKnown RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 C8orf59Q8N0T1 100 aaPredicted RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 PAPD5Q8NDF8 572 aaKnown RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 MAGEE2Q8TD90 523 aaPredicted RBP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ZNF516Q92618 1163 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 PROX1Q92786 737 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 PPP1R36Q96LQ0 422 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 RBBP8Q99708 897 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 SYTL2Q9HCH5 934 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 CHST12Q9NRB3 414 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ABCB10Q9NRK6 738 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 RNF19AQ9NV58 838 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ZDHHC2Q9UIJ5 367 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ANAPC2Q9UJX6 822 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 ANKRD6Q9Y2G4 727 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 PCDHGB1Q9Y5G3 927 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 PRUNE2Q8WUY3 3088 aa13.07□□□□□ -0.32
CNKSR3-204ENST00000479339 A0A087WZ62 844 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 PDZK1P1A8MUH7 402 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 SDHDO14521 159 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 HOXA2O43364 376 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 LDLRP01130 860 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 APOA1P02647 267 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 IL32P24001 234 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 YWHABP31946 246 aaKnown RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ATP4BP51164 291 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 KCNQ1P51787 676 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 LIMK2P53671 638 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 DMP1Q13316 513 aaPredicted RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 CRY1Q16526 586 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 SNAP47Q5SQN1 464 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 FAM102BQ5T8I3 360 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 TTC23Q5W5X9 447 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 DCLK2Q8N568 766 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 BEND7Q8N7W2 519 aaPredicted RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 MUS81Q96NY9 551 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 RNF157Q96PX1 679 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 FDXACB1Q9BRP7 624 aaPredicted RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 APOBEC3GQ9HC16 384 aaKnown RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 MRM3Q9HC36 420 aaKnown RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ZNF358Q9NW07 568 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 NUP50Q9UKX7 468 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 USP18Q9UMW8 372 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 PDE10AQ9Y233 779 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 GRIP1Q9Y3R0 1128 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 A0A096LPK6 155 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 MAGEB16A2A368 324 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 NRP1O14786 923 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 EXTL3O43909 919 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 TRIM16O95361 564 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 HPRP00739 348 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 GFAPP14136 432 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 DDX5P17844 614 aaKnown RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 MIPP30301 263 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 HADHAP40939 763 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 TARDBPQ13148 414 aaKnown RBP eCLIP13.06□□□□□ -0.323e-7■■■■□ 23.3
CNKSR3-204ENST00000479339 PSMD5Q16401 504 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 CARTPTQ16568 116 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 STEAP3Q658P3 488 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 SPPL3Q8TCT6 385 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 GLMNQ92990 594 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 SDCCAG3Q96C92 435 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 TSNARE1Q96NA8 513 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 GON7Q9BXV9 100 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 DGCR6LQ9BY27 220 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ZNF717Q9BY31 904 aaPredicted RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ASPSCR1Q9BZE9 553 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 C12orf4Q9NQ89 552 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ANKEF1Q9NU02 776 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 ASNSD1Q9NWL6 643 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 FBXO5Q9UKT4 447 aa13.06□□□□□ -0.32
CNKSR3-204ENST00000479339 A3GALT2U3KPV4 340 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms